Part of scaffold_187 (Scaffold)

For more information consult the page for scaffold_187 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC46A2 ENSTTRG00000009300 (Bottlenosed dolphin)

Gene Details

solute carrier family 46, member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008816, Bottlenosed dolphin)

Protein Percentage 94.48%
cDNA percentage 95.76%
Ka/Ks Ratio 0.27863 (Ka = 0.0266, Ks = 0.0955)

TSCOT ENSBTAG00000013670 (Cow)

Gene Details

thymic stromal cotransporter homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018168, Cow)

Protein Percentage 87.08%
cDNA percentage 90.04%
Ka/Ks Ratio 0.20397 (Ka = 0.063, Ks = 0.3091)

SLC46A2  (Minke Whale)

Gene Details

solute carrier family 46, member 2

External Links

Gene match (Identifier: BACU007332, Minke Whale)

Protein Percentage 95.58%
cDNA percentage 97.54%
Ka/Ks Ratio 0.61744 (Ka = 0.0206, Ks = 0.0334)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1428 bp    Location:165353..154720   Strand:-
>bmy_05192
ATGGGCCCGGGGACCATCTGCCCGTGCAGGGGCCCCCTGCCTCGCCTCCAGGCATGGACCTGGGTCGAGCCCGTGGTGGCCTCCACCCAGATGGCCACCTCTCTCTACGACGCGGGGCTGCTCCTCGTGGTGAAGGCGTCCTTCGGAGTGGGGGTCTTGTCCAACCACAGCGCCAGCCCATCGCCCCAGGGGACCCTAGAGAACCAACAGCAGAGAGCCATCTCCAACTTCTACATCATCTACAACCTTGTGATGGGCCTGACACCCCTGCTGTCGGCCTATGGGCTGGGCTGGCTCAGCGACCGCTACCACCGCAAGATCTCCATCTGCGTGCCTCTGCTGGGCTTCATGCTCTCCCGCCTCGCGCTGCTGCTCAAGGTGCTGCTGGACTGGCCCGTGGAGATGCTATACGGGGCGGCGGCGCTGAACGGGCTGTGTGGTGGCTTCTCGGCGTTCTGGTCGGGGGTCATGGCCCTGGGATCCCTCGGCTCCTCGGAGGGCCGCCGCTCCCTGCGCCTCATCGTGATTGACTTGATCCTGGGCTTGGCGGGATTCTGCGGGAGCATGATCTCTGGGCACCTCTTCAAGCAGATAGTCGGGCACTCCAGCGAGGGCCTGGTGCTGACCGCCTTCAGCGTGAGCTGTGCCACCTGTGCCCTTTTCTACAGCCTCTTGGTGCTGAAGGTCCCTGAGTCCAAGGCCAAGCCCAGCAAGGCTGTGGATACGGTGTCTGGCACRGCCGGCACCTATAACGCCCTGGATCCTGATCCAACAGACATGCAGAGTGTGGTGAGGCACCCTTCATCTCCTGCAAAAGCAAAGCCCGAGAAAACCATTATTGCCCTGCTCTTTGTGGGTGCCATCGTATATGACCTGGCAGTGGTGGGCACAGTGGACATGATACCCCTTTTTGTGCTGAGGGAGCCTCTGAGTTGGAACCAAGTGCAGGTGGGCTATGGTATGGCTTCAGGGTACACCATCTTCATCACCAGCTTCCTGGGCGTCCTGGTCTTCTCCCGCTACTTCCAGGACACCACCATGATCATGATTGGAATGGCCTCCTTTGCGTCTGGAGCCCTTCTCTTGGCTTTTGTGAAAGAGACATACATGTTCTACATTGCTCGGGCCGTCATGCTGTTCGCTCTCATCCCCATCACAACCATCCGATCGGCAATGTCCAAACTCATCAAGGGCTCCTCTTATGGAAAGGTGTTTGTCATCCTGCAGCTGTCCCTGGCTCTGACCGGGGTGGTGACATCCACGGTGTACAACAAGATCTATCAGCTCACYATGGAGAAGTTCGTTGGCACCTGCTTTGCACTCTCCTCCTTTCTCTCCTTCCTGGCCATCATCCCRATTGGCATCGTGGCCTATAAGCAAGCCTCATGGTTGCAGCATGGAGACATTGCAGAGAAAGGAAGGTGCTGA

Related Sequences

bmy_05192T0 Protein

Length: 476 aa      View alignments
>bmy_05192T0
MGPGTICPCRGPLPRLQAWTWVEPVVASTQMATSLYDAGLLLVVKASFGVGVLSNHSASPSPQGTLENQQQRAISNFYIIYNLVMGLTPLLSAYGLGWLSDRYHRKISICVPLLGFMLSRLALLLKVLLDWPVEMLYGAAALNGLCGGFSAFWSGVMALGSLGSSEGRRSLRLIVIDLILGLAGFCGSMISGHLFKQIVGHSSEGLVLTAFSVSCATCALFYSLLVLKVPESKAKPSKAVDTVSGTAGTYNALDPDPTDMQSVVRHPSSPAKAKPEKTIIALLFVGAIVYDLAVVGTVDMIPLFVLREPLSWNQVQVGYGMASGYTIFITSFLGVLVFSRYFQDTTMIMIGMASFASGALLLAFVKETYMFYIARAVMLFALIPITTIRSAMSKLIKGSSYGKVFVILQLSLALTGVVTSTVYNKIYQLTMEKFVGTCFALSSFLSFLAIIPIGIVAYKQASWLQHGDIAEKGRC*