Sequence detailsbmy_05195 (Coding sequence)

Part of scaffold_187 (SequenceType object (1))

For more information consult the page for scaffold_187 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC31A2ENSTTRG00000003242 (Bottlenosed dolphin)

Gene Details

solute carrier family 31 (copper transporter), member 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003039, Bottlenosed dolphin)

Protein Percentage 95.04%
cDNA percentage 96.93%
Ka/Ks Ratio 0.4548 (Ka = 0.0247, Ks = 0.0543)

SLC31A2ENSBTAG00000005115 (Cow)

Gene Details

probable low affinity copper uptake protein 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000006742, Cow)

Protein Percentage 88.11%
cDNA percentage 89.51%
Ka/Ks Ratio 0.23049 (Ka = 0.0673, Ks = 0.2919)

SLC31A2 (Minke Whale)

Gene Details

solute carrier family 31 (copper transporter), member 2

External Links

Gene match (Identifier: BACU019221, Minke Whale)

Protein Percentage 97.46%
cDNA percentage 98.31%
Ka/Ks Ratio 0.31097 (Ka = 0.0115, Ks = 0.0371)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC31A2 (Human)   Slc31a2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 447 bp    Location:382769..388447   Strand:+
Raw sequence 
>bmy_05195
ATGCAATCCCTTCTCTTTCAGATGCATTTCATCTTCTCAGATGAGGTAGTGCTTCTCTTTGATTTCTGGAGTGTCCACAGTCCTGCAGGCATGGCCCTTTCGGTGTTGGTCATCTTGCTCCTGGCTGTGTTGTACGAAGGCATCAAGGTTGGCAAAGCCAGGCTGCTCCACCAGGCCCTGATGAGCCTGTCCATCTCCACCAGCCAGCAGCTCATCGAAGAGACAGACCAGAATTCTTCAAGCTCAGACCCTCCCCCAGTCAGCAGAACCCACCTCAGGTGGTTCTTGTGTCACTTCGGCCAGTCTCTACTTCATGTCGCTCAGGTGGTCATCGGCTACTTCATGATGCTGGCTGTTATGTCCTACAACACCTGGATTTTCTTCGGCGTGGTCCTGGGCTCAGGTGTGGGCTACTACCTAGCCTATCCGCTTCTCAGCATGACTTAG

Related Sequences

bmy_05195T0 SequenceType object (3)

Length: 149 aa      View alignments
>bmy_05195T0
MQSLLFQMHFIFSDEVVLLFDFWSVHSPAGMALSVLVILLLAVLYEGIKVGKARLLHQALMSLSISTSQQLIEETDQNSSSSDPPPVSRTHLRWFLCHFGQSLLHVAQVVIGYFMMLAVMSYNTWIFFGVVLGSGVGYYLAYPLLSMT*