Sequence detailsbmy_05197 (Coding sequence)

Part of scaffold_187 (SequenceType object (1))

For more information consult the page for scaffold_187 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC31A1ENSTTRG00000003244 (Bottlenosed dolphin)

Gene Details

solute carrier family 31 (copper transporter), member 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003041, Bottlenosed dolphin)

Protein Percentage 98.95%
cDNA percentage 98.25%
Ka/Ks Ratio 0.15255 (Ka = 0.0074, Ks = 0.0488)

SLC31A1ENSBTAG00000021678 (Cow)

Gene Details

high affinity copper uptake protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028887, Cow)

Protein Percentage 94.71%
cDNA percentage 92.42%
Ka/Ks Ratio 0.10124 (Ka = 0.0294, Ks = 0.2906)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC31A1 (Human)   Slc31a1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 576 bp    Location:469050..473219   Strand:+
Raw sequence 
>bmy_05197
ATGGGCCATTTCCACCACATGGGGATGAGTATGGGGATGAGCAGTGGGGACGACAACAGTACCATGGCACCTTCTCACCATCACCCGACCTCTTCAGCCTCCCACTCCCATGATCACATGATGATGATGATGCCTATGACCTTCTACTTTGGCTTTAAGAACGTTGAACTATTGTTCTCTGGTTTGGTGATCAATACAGCTGGAGAAATGGCTGGAGCTTTTGTGGCAGTGTTTTTACTAGCCATGTTCTACGAAGGACTCAAGATAGCCCGAGAGGGCCTCCTGCGCAAGTCACAAGTCAGCATTCGGTACAATTCCATGCCTGTCCCAGGACCAAATGGAACCATCCTTATGGAGACCCACAAAACTGTTGGGCAACAGATGCTGAGCTTTCCTCACCTTCTGCAAACAGTGCTGCACATCATCCAGGTGGTCATCAGCTACTTCCTCATGCTCATCTTCATGACCTACAACGGGTACCTCTGCATTGCTGTAGCGGCAGGGGCTGGCATGGGGTACTTTCTCTTCAGCTGGAAGAAGGCAGTAGTAGTGGACATCACAGAACATTGCCATTAA

Related Sequences

bmy_05197T0 SequenceType object (3)

Length: 192 aa      View alignments
>bmy_05197T0
MGHFHHMGMSMGMSSGDDNSTMAPSHHHPTSSASHSHDHMMMMMPMTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIAREGLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGMGYFLFSWKKAVVVDITEHCH*