Part of scaffold_187 (Scaffold)

For more information consult the page for scaffold_187 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AMBP ENSTTRG00000005390 (Bottlenosed dolphin)

Gene Details

Alpha-1-microglobulin/bikunin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005079, Bottlenosed dolphin)

Protein Percentage 84.87%
cDNA percentage 86.69%
Ka/Ks Ratio 0.37711 (Ka = 0.0205, Ks = 0.0544)

AMBP ENSBTAG00000015676 (Cow)

Gene Details

protein AMBP precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020817, Cow)

Protein Percentage 84.45%
cDNA percentage 87.25%
Ka/Ks Ratio 0.20983 (Ka = 0.0793, Ks = 0.3779)

AMBP  (Minke Whale)

Gene Details

alpha-1-microglobulin/bikunin precursor

External Links

Gene match (Identifier: BACU007315, Minke Whale)

Protein Percentage 95.38%
cDNA percentage 95.66%
Ka/Ks Ratio 0.33711 (Ka = 0.0314, Ks = 0.0931)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 717 bp    Location:1202969..1188514   Strand:-
>bmy_05212
ATGCGGAGTCTTGGGGCCCTGCTCCTGCTGCTGACTGCCTGCCTGGCGGTGAGTGCCAGCCCTGTGACGACGTTGCCCGACGACATCCAAGTGCAGGAGAACTTCGACCTGTCTAGGATCTACGGGAAATGGTTCCACGTGGCCGTGGGTTCCACCTGCCCGTGGCTGAAGAGGTTCAAGGACAAGATGACCATGAGCTCGCTGGTGCTGGGAGAGGGAGCAACGGACAGGGAGATCAGCGTGACTAATACTCACTGGCGGAAAGGTGTCTGTGAGGCGATCTCTGGGGCTTATGAGAAAACAGGCACTGATGGAAAGTTCGTCTATCACAAACCCAAATGGAACATCACCATGGAGTCCTATGTGGTCCACACCAACTATGATGAGTATGCCATTTTTCTGACCAAGAAATTCAGCCGCCGCCATGGACCCACCATTACTGCCAAGCTCTATGGGCGGGAGCCACAGCTTCGGGAAACCCTGCTGGAGCAGTTCAGGGAAGTTGCCCTGGGTGTGGGCATCCCTGAGGACGCCATCTTCACGATGCCCGACAGAGGTGAGTGTGTCCCTGGGGAGCAGGAGCCAGCGCCCTCTCCACTCTCGAGAGCCCAGCGGTCTGTTCTGCCCCAGGAAGAGGAAGGATCAGGGGCTGGACAACTAATAACTGATTTCGGCAAGAAAGAAGGGGATGAGGAGTTGCTGCGCTTCTCCAACTGA

Related Sequences

bmy_05212T0 Protein

Length: 239 aa      View alignments
>bmy_05212T0
MRSLGALLLLLTACLAVSASPVTTLPDDIQVQENFDLSRIYGKWFHVAVGSTCPWLKRFKDKMTMSSLVLGEGATDREISVTNTHWRKGVCEAISGAYEKTGTDGKFVYHKPKWNITMESYVVHTNYDEYAIFLTKKFSRRHGPTITAKLYGREPQLRETLLEQFREVALGVGIPEDAIFTMPDRGECVPGEQEPAPSPLSRAQRSVLPQEEEGSGAGQLITDFGKKEGDEELLRFSN*