Sequence details bmy_05223 (Coding sequence)

Part of scaffold_184 (Scaffold)

For more information consult the page for scaffold_184 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAPN14 ENSTTRG00000000166 (Bottlenosed dolphin)

Gene Details

calpain 14

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000157, Bottlenosed dolphin)

Protein Percentage 73.16%
cDNA percentage 81.0%
Ka/Ks Ratio 0.51691 (Ka = 0.1918, Ks = 0.371)

CAPN14 ENSBTAG00000015865 (Cow)

Gene Details

calpain-14

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021091, Cow)

Protein Percentage 73.61%
cDNA percentage 82.1%
Ka/Ks Ratio 0.53691 (Ka = 0.1777, Ks = 0.3309)

CAPN14  (Minke Whale)

Gene Details

calpain 14

External Links

Gene match (Identifier: BACU014584, Minke Whale)

Protein Percentage 56.81%
cDNA percentage 67.61%
Ka/Ks Ratio 0.68947 (Ka = 0.4035, Ks = 0.5852)

Additional orthologs identified in other species via the OPTIC pipeline.

CAPN14 (Human)  

Genome Location

Sequence Coding sequence

Length: 1302 bp    Location:334144..313651   Strand:-
Raw sequence 
>bmy_05223
ATGTGCAGGCCTGTACAGTACATCCATGCAGACACTGTGGTCTGTGCACGCATGTCCAGCAGATTCATGTGGATACTGTGTGCTATCTGGCTTAGGCGACTGCTGGTTCTTGGCGGCTTTGCAAGCTCTGACTTTGCACCAGGACATCCTGAGTCGTGTCATTCCCCTGAATCATTCTGGCACTTTGGGAAGTGGGTTCCAGTGGTGGTAGATGACCGACTGCCTGTGAATGAGGCTGGCCAGCTGGTCTTTGTCTCTTCTACCTACAAGAACTTGTTCTGGGGAACGCTTCTGGAAAAGACCTATGCTAAGCTCTCTGGCTCCTATGAAGACTTGCAGCGTGAACAGGTATCTGAAGCCCTTGTGGACTTCACTGGAGGGGTGACAATGACCATCAACCTGGCAGAAGCCCCCGGCAACCTCTGGGACATCCTAACCCGAACCACCTACGGCAGAACCCTGATTGGCTGTCAGACCCACTCAAGGAAGGAGAGAGCGCTGAGGAACGGGCTGGTGCAAGGCCACGCCTGTACTCTCACAGGGATCAGGAAGGTGACCTCCAAACATGGACCTGCGTACCTCATCAAGCTGCGGAACCCCTGGGGAAGAGTGGAATGGAAAGGAGACTGGAGTGACAGGGTGGCACTGCAGGACTTTAAAGCACATTTCATGCTTCTGGTCATCTGTAAACTGAGTCCAGGCCTGCTGAGTCAGGAGGTGGGCCAGAAGTGGTCATACACCATGCTGGAGGGGAGATGGGAGAAAGGGACCACGGCTGGTGGCCCGACAAAGTCACCCCAAGGTGAGCCTAAGAACCCGCAGTTCCTGCTGTCGGTCTGGAGGCCCCAGGAGGGCAGGAGGTTCCAGATGCCCTGCAGCGTGCTGGTGTCCCTGCTCCAGAAGCCCAGGCACAGGCACCGCAACAAGAAGCCTCACCTTGCCATTGGCTTCTACCTCTTCAGGAGCTATGATGACCAGAGGAGACTGCCTCCCAAGTTCTTCTGCAAAAATGCTCCCCTGAATTGGCCTGAGACGTTTCTCAGAGAGAAGGAAGTGAGTCGGGAGCTGTGGCTGGAGCCTGGGACATACGTCATTGTGCCCTGCACATCTGAGTCCCGCCAGGGGTCTGAGTTCGTCCTCAGAGTCTTCTCCAGGAAGCACGAAACTGTAGACCAAAGTGAAGGGCAGGAGGAATTCTTCACCAAACTCTTTGAAAAGCATCCAGAAATAAATGCAGTCCAACTGCAGAAGATCCTGAACCACATGCCCTGGTCAGGAGGTTTTCCACAAGCAAGACACTAA

Related Sequences

bmy_05223T0 Protein

Length: 434 aa      View alignments
>bmy_05223T0
MCRPVQYIHADTVVCARMSSRFMWILCAIWLRRLLVLGGFASSDFAPGHPESCHSPESFWHFGKWVPVVVDDRLPVNEAGQLVFVSSTYKNLFWGTLLEKTYAKLSGSYEDLQREQVSEALVDFTGGVTMTINLAEAPGNLWDILTRTTYGRTLIGCQTHSRKERALRNGLVQGHACTLTGIRKVTSKHGPAYLIKLRNPWGRVEWKGDWSDRVALQDFKAHFMLLVICKLSPGLLSQEVGQKWSYTMLEGRWEKGTTAGGPTKSPQGEPKNPQFLLSVWRPQEGRRFQMPCSVLVSLLQKPRHRHRNKKPHLAIGFYLFRSYDDQRRLPPKFFCKNAPLNWPETFLREKEVSRELWLEPGTYVIVPCTSESRQGSEFVLRVFSRKHETVDQSEGQEEFFTKLFEKHPEINAVQLQKILNHMPWSGGFPQARH*