Part of scaffold_184 (Scaffold)

For more information consult the page for scaffold_184 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NLRC4 ENSTTRG00000000540 (Bottlenosed dolphin)

Gene Details

NLR family, CARD domain containing 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000506, Bottlenosed dolphin)

Protein Percentage 87.68%
cDNA percentage 90.25%
Ka/Ks Ratio 0.79541 (Ka = 0.0603, Ks = 0.0758)

NLRC4 ENSBTAG00000008223 (Cow)

Gene Details

NLR family CARD domain-containing protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010814, Cow)

Protein Percentage 85.94%
cDNA percentage 89.25%
Ka/Ks Ratio 0.43954 (Ka = 0.0899, Ks = 0.2046)

NLRC4  (Minke Whale)

Gene Details

NLR family, CARD domain containing 4

External Links

Gene match (Identifier: BACU014589, Minke Whale)

Protein Percentage 91.65%
cDNA percentage 93.75%
Ka/Ks Ratio 0.85755 (Ka = 0.0636, Ks = 0.0742)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2922 bp    Location:1095780..1045312   Strand:-
>bmy_05232
ATGAATTTCATAAAGGAGAACAGTCAAATTCTCATTCAAAGGATGGGAATGACTGTTATAAAGCAAATTTTGGATGAGCTATTTGTATGGAATGTTCTGAATTACGGAGAAGTAAACATCATTTGCTGTGAGAAGGTCGAGCAGGAAGCTGCAAGAGGGATCATTCACATGATTTTGAAGAAGGGTTCAGAAGCCTGTAACCTCTTTCTTAAATCCCTTGAAAAGTGGAACTATCCTCTGTTTCAGGACTTGCATGGACTTAGTCTTTTTCATCAGATGTCAGAAGAAGACTTAGATGGTTTGGCTCAGGATTTAAAGGACTTATACCATACCCCATCTTTTCTGAACTACTATCCGCTGGGTGAAGATATTGACATTATTTTTAATTTGAAAAGCACCTTCACAGAACCGGTTCTATGGAGGAAGGACCAACACCATCACCGTCTGGAGCAGCTGACCCTGAGTGGCCTGCTGGACACTCTTCAGAGCCCCTGCATCATCGAAGGGGAATCGGGCAAAGGGAAGTCCACTCTGCTGCAGCGAATCGCCATGCTCTGGGCCTCTGGAGAGTGCCAGGCTCTGACCAAGTTCAAATTAGTTTTATTTCTCCATCTGAGCAGGGCCCAGAGTGGACTCTTCGAAACCCTGTGTGACCAACTCTTGGATATACCTGACACAATCAGGAAGCAGACTTTCATGGCCATGCTACTGAAGCTACGGCAGAGGGTTCTTTTTCTCCTAGATGGCTACAATGAATTCAAGGCCCAGAACTGCCCAGAAATCGAAGCCCTAATAAAGGAAAACCACCGCTTCAAGAATATGGTCATCGTCACCACCACCACGGAGTGCCTGAGGTACATCAGGCAGTTTGGTGCGCTGATTGCCGAGGTGGGGGACATGACCGAGGAGAGTGCCCAGGCTCTCATCCGGGAAGTGCTGATAAAGGAGCTCGCTGAAGGCTTGTTGCTCCAAATTCAGAAATCCAGGTGCTTGAGGAATCTGATGAAGACCCCTCTCTTTGTGGTCATCACTTGTGCAATCCAGATGGGGAAAAGTGAGTTCCACTCTAACACACAAACCACACTGTTCTGTGCCTTCTACGATCTGCTAATAAATAAAAACAAGCACAAACGTAAAGGGGTGGCTCCAAGTGAGGTCACTCGGAGCCTGGACCACTGTGGGGACCTAGCTCTGGAGGGCGTGTTCTCCCACAGGTTTGATTTTGAACCGGAGGACTTGTCCAGTGTGAACGAGGATGTCCTGCTGACAACGGGACTCCTCTGTAAATACACAGCTCAACGGTTCAAGCCGAAGTATAAATTCTTTCATAAATCATTCCAGGAGTACACAGCAGGACGCAGACTCAGCAGTTTATTGACGTCTGAAGAGCCAGCAGAGGTGACCAAGGGGAACAGTCACTTGCAGAAAATGGTTTCCATTTCAGACATTACATCCAAGTACAGCAACCTGCTCCTGTATACGTGTGGGTCATCTGCCGAAGCCACCCGGACTGTTCTGAAACACCTGGCATCAGTGTATCAACATGGCAGCCTCGGTGGGCTTTTCGTCACCAAGAGGCCTCTCTGGAGGCAGGAATCTATGCAAAATGTGAAAAGCACCACTGTGCAAGAAATTCTGAAAGCCATAAACATCAACTCCTTTACAGAGTGTGGCATCAATTTATTCTGTGAGAGTATATCCACATCAAGCCTGAGAGAAGAATTTGAAGCTTTCTTTCATGGTAAAAGCCTACATATCAACTCAGAGAACATCCCTGATTACTTATTTGACTTCTTTGAAAACTTGCCTAATTGTGCAAGTGCTCTGGACTTTGTTAAACTAGACCTGTACGGGGGAGCTGTGGCTTCGCAGGATGAGACCGCAAAAGACGCAAGAAGGATCCACATGCAGGAGTCCTCAGGAACCTACATTCCCAGCAGGGCTGTGTCTTTGTTCTTCAACTGGAAGCAGGAATTCAAGACATTGGAGGTCACACTCCGGGATTTCTGCAAGTTGAATAAGCAAGATATCAAATACCTGGGGAAAATATTCAGCTCTGCTACAAGCCTCAGGTTGTACATTAAGAGATGTGCCGGCGTGGCTGGAAGCCTCAGTTCGGTCCTCAGCACCTGTAAGAACATTCATTCCATCATAGTGGAAGCCAGTCCCCTCGCCTTAGAAGACGAGCGGCATATCACATCTGTGACAAACCTGCACACCTTAAGTATTCATGACCTAGGGACTCAACGGCTACCAGGTGGTCTGACTGACAGCTTAGGTAATTTGAAGAACCTTATGAAGCTCATACTGGATAATATTAAGATGAATGAGGAAGATGCTATAAAACTAGCTGAAGGTCTGACAAATCTGAAAAAGATGTGTTTACTTCGTTTGACCCGCTTGTCTGATATAGGGGAGGGAATGGATTACATAGTCAAGTCTCTGTCAGCTGAACCCTGTGACCTTAAAGAAATCCAATTAGTCTCCTGCTGCCTGTCAGGAAATGCTGTGAAAACCATAGTTGACAGGCTGCACATCTTAGAACAGCTAAACGTGCTGATGCTGCCCTGGTGTGGTGATGGACGAGTCAGCTTGGCCAGGCTGCTGGAGCAACTGAAGGGGGCCCCACAGCTCATCAAGCTTGGGCTGAGAAACTGGAGACTCACAGATGCAGAGATTAGAATTCTAGGTGCATTTTTTGAAAAGAACCTTCTGAAAAACTTCCAGCAGCTGGATTTGGCAGGAAATTGTGTAGCTGCTGATGGCTGGAAATGTCATAAATCTTCAGGAGTAAGACAAGCCATGTCCACAAATCGAGTCATCTTTGATTTCCCCCTTTCCTTTGCCACTGTGAGATGGAACTTCACAAGGATACTAAATGAAAAGCAGTTTCAACTGCAATATACAGCTGACCTGAAGGAA

Related Sequences

bmy_05232T0 Protein

Length: 974 aa      View alignments
>bmy_05232T0
MNFIKENSQILIQRMGMTVIKQILDELFVWNVLNYGEVNIICCEKVEQEAARGIIHMILKKGSEACNLFLKSLEKWNYPLFQDLHGLSLFHQMSEEDLDGLAQDLKDLYHTPSFLNYYPLGEDIDIIFNLKSTFTEPVLWRKDQHHHRLEQLTLSGLLDTLQSPCIIEGESGKGKSTLLQRIAMLWASGECQALTKFKLVLFLHLSRAQSGLFETLCDQLLDIPDTIRKQTFMAMLLKLRQRVLFLLDGYNEFKAQNCPEIEALIKENHRFKNMVIVTTTTECLRYIRQFGALIAEVGDMTEESAQALIREVLIKELAEGLLLQIQKSRCLRNLMKTPLFVVITCAIQMGKSEFHSNTQTTLFCAFYDLLINKNKHKRKGVAPSEVTRSLDHCGDLALEGVFSHRFDFEPEDLSSVNEDVLLTTGLLCKYTAQRFKPKYKFFHKSFQEYTAGRRLSSLLTSEEPAEVTKGNSHLQKMVSISDITSKYSNLLLYTCGSSAEATRTVLKHLASVYQHGSLGGLFVTKRPLWRQESMQNVKSTTVQEILKAININSFTECGINLFCESISTSSLREEFEAFFHGKSLHINSENIPDYLFDFFENLPNCASALDFVKLDLYGGAVASQDETAKDARRIHMQESSGTYIPSRAVSLFFNWKQEFKTLEVTLRDFCKLNKQDIKYLGKIFSSATSLRLYIKRCAGVAGSLSSVLSTCKNIHSIIVEASPLALEDERHITSVTNLHTLSIHDLGTQRLPGGLTDSLGNLKNLMKLILDNIKMNEEDAIKLAEGLTNLKKMCLLRLTRLSDIGEGMDYIVKSLSAEPCDLKEIQLVSCCLSGNAVKTIVDRLHILEQLNVLMLPWCGDGRVSLARLLEQLKGAPQLIKLGLRNWRLTDAEIRILGAFFEKNLLKNFQQLDLAGNCVAADGWKCHKSSGVRQAMSTNRVIFDFPLSFATVRWNFTRILNEKQFQLQYTADLKE