Part of scaffold_176 (Scaffold)

For more information consult the page for scaffold_176 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CENPT ENSTTRG00000009249 (Bottlenosed dolphin)

Gene Details

centromere protein T

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008772, Bottlenosed dolphin)

Protein Percentage 96.98%
cDNA percentage 98.16%
Ka/Ks Ratio 0.53417 (Ka = 0.0149, Ks = 0.0279)

CENPT ENSBTAG00000006404 (Cow)

Gene Details

centromere protein T

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008396, Cow)

Protein Percentage 85.13%
cDNA percentage 90.45%
Ka/Ks Ratio 0.5034 (Ka = 0.0813, Ks = 0.1614)

CENPT  (Minke Whale)

Gene Details

centromere protein T

External Links

Gene match (Identifier: BACU018116, Minke Whale)

Protein Percentage 98.22%
cDNA percentage 99.17%
Ka/Ks Ratio 1.25247 (Ka = 0.009, Ks = 0.0072)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1731 bp    Location:128890..134509   Strand:+
>bmy_05249
ATGGCGGACAGCTACAGCCGGGACAGCGAGCCTACGACGCGCACGCTGCTACGGCGCGTGCTGGATACAGCGGATCCGCGCACCCCGCGGCGACCCCGGAGTGCTCGGACTGATGTCCAGAGAGCCCTGCTTCAAACACCTTCCTCTAGGAGGCTGAGGAGCCAAACAAAGATGACTGCCAGGCGTTGTTCTCATAGAGCCAGGTCTATTGACAGATTGGCCCATGTTCAAGCCAGTGGACACCTGGAGGAACAGACACCCCGGACTCTGCTGAAGAACATCTTACTAACTGCCCCGGAATCTTCCATCCTAATGCCAGAGTCAGTGGTGAAGCCAGTGCCGGCACCGCAGGTGGTCCTGGCTTCCAGACGGGAAAGCGGTCGGGGCAGCCTGGAGCTGCAGCTTCCTGAACTCGAGCCCCCCACAACCCTGGCTCCAGGTCTGCTGGCTCTTGGCAGAAGGAAGCAGAGACTGAGGTTGTCAGTGTTTCAGCAAGGAGTGGACTTGGGACTGCCTCCCTCCCAAGAGCCTCATGGGAATGCTGATGCCTCTTCCCTCACCAGCTCCCTCAACTTGACCTTCGCCATACCTCTGCAGCCACAATCAGTGAAGAGGCCTGGTTTGGCCCGCAGACCTCCTACACGCCGAGCTGTAGATGTGGGTACACTTTTGCAGGATCTGCGAGATACTTCCCTGGCCTTGGCTCCTCCAGATGAGAGCCTCAAAACCCCTGTTGCTACTCTGCCAACAGACACAGTGTTGGAGGACACCCAGCCCTTCTCCCAGCCCTTGGTTGGCCGTTCCCCCAGTGTGCACCACTCCCTGCCTTGCCCCTCTCACTCTGGGGCTAAAGATGTGGAGAGGGCTGCCAGTCGCAGGACATGGAGCAGTGGGCTTGGGCTGCAGAACAACGGTGCTGGGAAACCAGCCCAGCTTCTGGCAGGAAAGGTGGAGGAGGTTGGTGCCCTTGCTATGGGCTTTCCGAACATCAGCAGTAATATCTCTGGAGAAGATGGAGTAGAGCCCTTACAGAATGGAGTAGGTGAGGAGGCAGAGGAAAGAATGGAAGAAAGCTTGAGGGAAGTGGAGAAGGCAGCAGAAGCACAAGGATCCGCCAGAGCTGAAGAGCCTGAAGGACACATAGAAGTGACCGAAGCAGAGGGATCCTGGGGGGCTGTCGAGGCCAAGGAGCCAGAAGGATCTTCAGGGGATGAAGACACCTCTGGTAGAACAGCAAGTCCAGAGTTGGCCTCCAGCACCCCAGAGTTCCTTCGGGCCAGGCGACTTCAGTTTCTTGAGACAGCTCCACCGCCTAGCACTGCAGTGTTACCTTCAGAGCCTCCGGAGCCTCTGTCGGCCGGGCTTTCTCCCAAGCCCCGAATCCCTGGCTCCAGACCCCGTCAAGATCCCTACAAGACTGGACTGAACCACTATGCGAAACTCTTTAGCTTCTATGCTAAGATGCCCATGGAGAAGAAGGCTGTGGAGATGGTGGAGAAGTGCCTGGACAAGTATTTCCAGCATCTTTGTGACGACCTGGAGGTATTTGCTGCTCATGCTGGCCGCAAGACTGTGAGGCCAGAGGACCTGGAGCTGCTGATGCGAAGGCAGGGCCTGGTCACTGACCAAGTCTCCCTGCATGTGCTCGTGGAGCGGCACCTGCCCCTGGAGTACCGACAGCAGCTCATCCCTTGTGCATTCAGTGGCAACACTGTCTTCCCTGCCCAGTAG

Related Sequences

bmy_05249T0 Protein

Length: 577 aa      View alignments
>bmy_05249T0
MADSYSRDSEPTTRTLLRRVLDTADPRTPRRPRSARTDVQRALLQTPSSRRLRSQTKMTARRCSHRARSIDRLAHVQASGHLEEQTPRTLLKNILLTAPESSILMPESVVKPVPAPQVVLASRRESGRGSLELQLPELEPPTTLAPGLLALGRRKQRLRLSVFQQGVDLGLPPSQEPHGNADASSLTSSLNLTFAIPLQPQSVKRPGLARRPPTRRAVDVGTLLQDLRDTSLALAPPDESLKTPVATLPTDTVLEDTQPFSQPLVGRSPSVHHSLPCPSHSGAKDVERAASRRTWSSGLGLQNNGAGKPAQLLAGKVEEVGALAMGFPNISSNISGEDGVEPLQNGVGEEAEERMEESLREVEKAAEAQGSARAEEPEGHIEVTEAEGSWGAVEAKEPEGSSGDEDTSGRTASPELASSTPEFLRARRLQFLETAPPPSTAVLPSEPPEPLSAGLSPKPRIPGSRPRQDPYKTGLNHYAKLFSFYAKMPMEKKAVEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVRPEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQQLIPCAFSGNTVFPAQ*