Sequence detailsbmy_05260 (Coding sequence)

Part of scaffold_176 (SequenceType object (1))

For more information consult the page for scaffold_176 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AGRPENSTTRG00000009147 (Bottlenosed dolphin)

Gene Details

agouti related protein homolog (mouse)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008661, Bottlenosed dolphin)

Protein Percentage 95.52%
cDNA percentage 97.01%
Ka/Ks Ratio 0.69118 (Ka = 0.0251, Ks = 0.0363)

AGRPENSBTAG00000014556 (Cow)

Gene Details

agouti-related protein precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019347, Cow)

Protein Percentage 90.3%
cDNA percentage 90.8%
Ka/Ks Ratio 0.1753 (Ka = 0.0467, Ks = 0.2665)

Additional orthologs identified in other species via the OPTIC pipeline.

AGRP (Human)   Agrp (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 405 bp    Location:403757..404519   Strand:+
Raw sequence 
>bmy_05260
ATGCTGACCGCAGTGCTGCTGAGTTGTGCCCTGCTGCTGGCAATGCCCGCCATGCAGGGGGCCCAGATGGGCTTGGCTCCCCTGGAGGGCATCGGAAGGCCCGACCAAGCCTTGTTCCCAGAGCTCCAAGGCCTGGGCCTGCAGCCCCCGCTGAAGAGGACAACGGCAGAACAGGTGGAAGAGGCTCTGCTGCAGAAGGCAGAGGCCAAGGCCTTGGCAGAGGTGCTAGATCCGGAAGGACGCAAGCCGCGCTCCCCGCGTCGCTGCGTAAGGCTGCACGAGTCCTGTCTGGGACACCAGGTACCATGCTGYGACCCATGTGCCACGTGCTACTGCCGTTTCTTCAACGCCTTCTGCTACTGCCGCAAGCTGGGTACTGCCACGAACCCCTGCAGCCGCACCTAG

Related Sequences

bmy_05260T0 SequenceType object (3)

Length: 135 aa      View alignments
>bmy_05260T0
MLTAVLLSCALLLAMPAMQGAQMGLAPLEGIGRPDQALFPELQGLGLQPPLKRTTAEQVEEALLQKAEAKALAEVLDPEGRKPRSPRRCVRLHESCLGHQVPCCDPCATCYCRFFNAFCYCRKLGTATNPCSRT*