Part of scaffold_176 (Scaffold)

For more information consult the page for scaffold_176 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATP6V0D1 ENSTTRG00000009070 (Bottlenosed dolphin)

Gene Details

ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008589, Bottlenosed dolphin)

Protein Percentage 89.74%
cDNA percentage 90.03%
Ka/Ks Ratio 0.21029 (Ka = 0.0711, Ks = 0.3382)

ATP6V0D1 ENSBTAG00000014553 (Cow)

Gene Details

V-type proton ATPase subunit d 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019346, Cow)

Protein Percentage 89.74%
cDNA percentage 87.08%
Ka/Ks Ratio 0.10283 (Ka = 0.0705, Ks = 0.6856)

ATP6V0D1  (Minke Whale)

Gene Details

ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1

External Links

Gene match (Identifier: BACU018106, Minke Whale)

Protein Percentage 89.74%
cDNA percentage 90.98%
Ka/Ks Ratio 0.2817 (Ka = 0.0715, Ks = 0.2538)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1158 bp    Location:428918..444151   Strand:+
>bmy_05261
ATGGTTCTACTTGTACTTGGACTCTGGGGCCCAGTGTCCTGGCTTTGGCCTGACTGCCCTGGAGTAGGCTCTGAGCCAACAGGGAGGTGGAGGCAGGGACAGGAGGTCAGGGTAGCAGCAGGGCACAACTGCAGGAGAGGGTCTGGGACCCAGAGTCGGGGTGGGGACAGGGACTTGGGGTCCTGGGGAGGCTCAGCACGGCCAGCTCTCACCCCCCACCCTTGGGTTTCAGACCTGAAGCTGCACCTGCAGAGCACCGACTACGGCAACTTCCTGGCCAATGAGGCATCACCGCTGACAGTGTCCGTCATCGATGACCGGCTCAAGGAGAAGATGGTGGTGGAGTTCCGCCACATGAGGAACCATGCCTATGAGCCGCTCGCCAGCTTCCTGGACTTCATTACTTACAGCTACATGATTGACAACGTAATCCTGCTCATCACGGGCACACTGCACCAGCGCTCTATCGCCGAGCTTGTGCCCAAGTGCCACCCACTAGGCAGCTTTGAGCAGATGGAGGCCGTGAACATCGCGCAGACGCCTGCCGAGCTCTACAATGCCATTCTGGTGGACACGCCCTTGGCGGCTTTCTTCCAGGACTGCATCTCAGAGCAGGACCTTGATGAGATGAACATCGAGATCATCCGAAACACGCTCTACAAGGCCTACCTGGAGTCCTTCTACAAGTTCTGCACCCTGCTGGGTGGGACCACAGCCGATGCCATGTGTCCCATCCTGGAGTTTGAAGCAGACCGCCGCGCCTTCATCATCACCATCAACTCCTTCGGCACAGAGCTTTCCAAGGAGGACCGTGCCAAGCTCTTTCCGCACTGCGGGCGGCTCTACCCTGAGGGCCTGGCCCAGCTGGCTCGGGCTGACGACTACGAGCAGGTCAAGAACGTGGCCGACTACTACCCGGAGTACAAGCTGCTCTTCGAGGGTGCGGGCAGCAACCCTGGAGACAAGACCCTGGAGGACCGATTCTTCGAGCACGAGGTGAAACTGAACAAGTTGGCCTTCCTGAACCAGTTCCACTTTGGTGTTTTCTACGCCTTTGTGAAGCTCAAGGAGCAGGAGTGTCGCAACATTGTATGGATTGCGGAGTGCATCGCCCAGCGCCACCGGGCCAAGATCGACAACTACATCCCCATCTTCTAG

Related Sequences

bmy_05261T0 Protein

Length: 386 aa      View alignments
>bmy_05261T0
MVLLVLGLWGPVSWLWPDCPGVGSEPTGRWRQGQEVRVAAGHNCRRGSGTQSRGGDRDLGSWGGSARPALTPHPWVSDLKLHLQSTDYGNFLANEASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKLFPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDRFFEHEVKLNKLAFLNQFHFGVFYAFVKLKEQECRNIVWIAECIAQRHRAKIDNYIPIF*