Part of scaffold_176 (Scaffold)

For more information consult the page for scaffold_176 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRC36 ENSTTRG00000000455 (Bottlenosed dolphin)

Gene Details

leucine rich repeat containing 36

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000429, Bottlenosed dolphin)

Protein Percentage 88.73%
cDNA percentage 90.88%
Ka/Ks Ratio 0.95508 (Ka = 0.0234, Ks = 0.0245)

LRRC36 ENSBTAG00000001838 (Cow)

Gene Details

leucine-rich repeat-containing protein 36

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002402, Cow)

Protein Percentage 92.81%
cDNA percentage 94.48%
Ka/Ks Ratio 0.30278 (Ka = 0.0359, Ks = 0.1185)

LRRC36  (Minke Whale)

Gene Details

leucine rich repeat containing 36

External Links

Gene match (Identifier: BACU018103, Minke Whale)

Protein Percentage 97.02%
cDNA percentage 97.88%
Ka/Ks Ratio 0.68414 (Ka = 0.0194, Ks = 0.0283)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1629 bp    Location:510308..489413   Strand:-
>bmy_05267
ATGCAGGAAGTGGCAAGAAGGGAGATGCCAAGTGAGAATCACCAGGAAGATGAATTCAGACGCTACTCGCCTCATCAATCCACAGTTCGAACCCCAGAGAAGATGGCTAGAGAAGGGTACCGAATATCTTTTTTGGACAACAAGTCTTCAGGTTCTTCTCCAGAAAAGGACTTGATACTAAAACCTGATACTTATCAGCTTACCCATGACGCCTCATTGGGTAAACGCCTGGATGTGGGTGATTCTAGACAGATTCATCCCTATCAGTTACCTTCAGATGCTGGTCTAGAAAATTATGGTAGTCATTATTCTCAAAATCCATCCCTGCATGGAAGTCTTGGTAAAAGGCCTCAGAGAAGCAGGAACTACCGAGAATATAGCACAAAACCTTCAAATAACATGAAGGCCACCACATCCCATTCCTGCGGAGACTTACTGACCTCTCTGTCAAACCCTGACTCCAGCACCGGAAGGCTTTTGAAGCTTAGTTCAGAGCAAAAATTATCCACCAGCCTCGGCGATTTAACACCAGCACATGGTTCTTTCCCAAACAACACCATCCTGGGAGACTCTCTGCGGACACTGCTGTTGCCTACTGGGACTTCAGAAAACAGAGAGAGTTTGACCAAGGGGTCATTAAGCCCATTGAGAAGAGGATTCAAACGGAAAGAAAATATCCTTGACACCCTGAATCCAAAACATGGTTTCAGAGATGCTACAGGCAGCGAGGCAAGTGTTGGCTTGTTTGTGCTCCCACTGATGCCTATTTTTCCAGACAAGAGCACTGGTGTTAATGTATTTAGGGCGAAGAAAATTATGATAGAAGATACTGTTACCTTTGAAATTATCCTTCCTCTCTCTAGTGACCTGGGCAGTTTGCATCGTTTGCCAGGAAACCACAGTCCCCCGATCTCTGCCAGAACATCCCATGTGGCCACTGTCCTCAGACAGCTCCTGGAGCTTGTGGATAAGCACTGGAACGGTTCCGGCTCCCTCCTCCTCAACAAGAAGTTTCTGGGTCCTGCCCGAGATCTGCTTCTGACTTTGGTAGTCCCTGCTCCTTCTCAGCAGTGGTGTCGCTCACATCCTGAAGATACATCAAAAGCCTTCCACAAGAGGGAGATGGAACTGAAGGAGACGGGGCAGCTGGTCCCTAATGACATGGAAAGTTTGAAGCAAAAACTGGTCAGAGTGCTGGAGGAAAACCTCATTTTGTCAGAAAAAATCCAGCAATTGGAGGAAGGTGCTACCACCTCAATTGTGAGTGGGCACCAGTCCCACACTTATGATGATCTTCTGCGCAAAAACCAACAGCTGAACATGCAGGTGGCTTGCCTGAACCAGGAGCTTGCCCAGCTGAAAAAGCTGGAGGAGACAGTGGCCCTTCTCCACGAAAGTCAGAGATCCCTGGTGGTAACTAATGAGTATCTGCTGCAGCAGCTGACTAAAGAGCAAAAAGGTTATTCTGGGAAAGCACTCCTGCCTCCTGAGAAGAGTCATCATTTGGGGAGATCATCGCCCTTTGGGAAAAGCACGCTGTCTTCCTCCTCACCAGTGGCACATGATACGGGTCAGTATCTAATACAGAGTGTTTCAGACTCTGTCCCAGAGCCTAGTCTATGGAGCTAG

Related Sequences

bmy_05267T0 Protein

Length: 543 aa      View alignments
>bmy_05267T0
MQEVARREMPSENHQEDEFRRYSPHQSTVRTPEKMAREGYRISFLDNKSSGSSPEKDLILKPDTYQLTHDASLGKRLDVGDSRQIHPYQLPSDAGLENYGSHYSQNPSLHGSLGKRPQRSRNYREYSTKPSNNMKATTSHSCGDLLTSLSNPDSSTGRLLKLSSEQKLSTSLGDLTPAHGSFPNNTILGDSLRTLLLPTGTSENRESLTKGSLSPLRRGFKRKENILDTLNPKHGFRDATGSEASVGLFVLPLMPIFPDKSTGVNVFRAKKIMIEDTVTFEIILPLSSDLGSLHRLPGNHSPPISARTSHVATVLRQLLELVDKHWNGSGSLLLNKKFLGPARDLLLTLVVPAPSQQWCRSHPEDTSKAFHKREMELKETGQLVPNDMESLKQKLVRVLEENLILSEKIQQLEEGATTSIVSGHQSHTYDDLLRKNQQLNMQVACLNQELAQLKKLEETVALLHESQRSLVVTNEYLLQQLTKEQKGYSGKALLPPEKSHHLGRSSPFGKSTLSSSSPVAHDTGQYLIQSVSDSVPEPSLWS*