Part of scaffold_176 (Scaffold)

For more information consult the page for scaffold_176 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HSF4 ENSTTRG00000010241 (Bottlenosed dolphin)

Gene Details

heat shock transcription factor 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009717, Bottlenosed dolphin)

Protein Percentage 91.32%
cDNA percentage 92.16%
Ka/Ks Ratio 0.39177 (Ka = 0.0619, Ks = 0.1579)

HSF4 ENSBTAG00000003514 (Cow)

Gene Details

heat shock factor protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004568, Cow)

Protein Percentage 96.37%
cDNA percentage 93.59%
Ka/Ks Ratio 0.06811 (Ka = 0.0167, Ks = 0.2445)

HSF4  (Minke Whale)

Gene Details

heat shock transcription factor 4

External Links

Gene match (Identifier: BACU018095, Minke Whale)

Protein Percentage 92.95%
cDNA percentage 93.66%
Ka/Ks Ratio 0.49636 (Ka = 0.0541, Ks = 0.1091)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1674 bp    Location:677237..672297   Strand:-
>bmy_05279
ATGCAGGACGCGCCAGCCGCGCTGCCCACGGAGCCGGGCCCTAGCCCCGTGCCAGCCTTCCTTGGCAAGCTATGGGCGCTGGTGGGCGACCCGGGCACCGACCACCTGATCCGCTGGAGCCCGAGCGGGACCAGTTTCCTCGTCAGCGACCAGAGCCGCTTCGCCAAGGAAGTGCTGCCCCAGTACTTCAAGCACAGCAACATGGCGAGCTTTGTGCGGCAACTCAACATGTACGGTTTTCGGAAGGTGGTGAGCATCGAGCAGGGTGGCCTGCTGAGGCCGGAACGGGACCACGTCGAGTTCCAGCACCCGAGCTTCGTGCGCGGCCGAGAGCAATTACTGGAACGCGTGCGGCGTAAGGTGCCTGCGCTGCGCGGCGACGACGGCCGCTGGCGCCCTGAGGACCTGGGCCGGCTTCTGGGCGAGGTGCAGGCTTTTCGGGGAGTGCAGGAGAGCACCGAGGCGCGGCTGCGGGAGCTCAGGCAGTGCGGGGGAGGGGGCGGAGGAGGATGGGGAGGGGGAAGGGGGGGGTCTGGGCGAGAGGGCACTGGCTTCCAGGCGTTTCTGGGCAGCTCCTTCCTCTCTCGTGCCTTGGCGCCTCCATCAAGACCAATGGGCCGAGCTGAGGAAGTCTGTTGTCTATGGACGGATGATCATCCGACTGGGCGCGGGTTCAGGCCTGCCATTCTGTGGGGGGTGGTGACCGGGCGAACTCTCAGATGCCTCAGCACCCTCCCACGCCTTTCCTCCAGGCAGAACGAGATCTTGTGGAGGGAGGTGGTGACGCTGCGGCAGAGCCACGGTCAGCAGCACCGGGTCATTGGCAAGCTGATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGTCTAGCAGCACAGGAGCTAAGAGAAAGCTGTCCCTGATGCTGGATGAGGGGTGCCCAACACCAGCCAAATTCAACGCCTGCCCCCTACCTGGTGCCCTCCTGCAGGACCCCTACTTTATCCAGTCGCCTCTCCCAGAGACCACCCTGGGCCTCAGCAGCCCTCACAGGGCCAGGGGCCCCATCATCTCTGACATTCCGGAAGACTCTCCATCCCCTGAAGGAACCAGGCTTTCTCCCTCCAGTGGTGGCAGGAGGGAGAAGGGCCTGGCACTGCTCAAAGAAGAGCCAGCCAGCCCAGGGGGGGAAGGCGAGGCCGGGCTGGCCCTGGCCCCAAACGAGTGTGACTTCTGCGTGACAGCACCCCCACCACTGCCTGTGGCTGTGGTGCAGGCCATCCTGGAAGGGAAAGGGAGCCTCAGCCCCGAGGGGCCCAGGAGTGCCCAGCAGCCTGAACCAAGAGGCCCCAGGGAGGTTCCTGACAGGGGGCCTCTGGACCTGGAGAGAGGAGCCCGGAGCCCGGAGAGTCTGTTGCCTCCAATGCTGCTTCGGGCCCCCCCTGAAAGTGTGGAGCCTGCAGGGCCCCTAGATTTGCAGCCCTTGGTTCCAGAGAAGGGTGAGACTGAGCTGGCGGTCAAGGGGTTAAATTCTCCAGGGCCAGGGAAGGACTCCATGCTGGGGGCACCACTCCTGCTGGATGTCCAAGCCGCTTTGGGAGGCCCAGCCCTCAGCCTGCCAGGAGCTTTAACCATTTACAGCACCCCTGAGAGCCGCGCCTCCTACCTGGGCCCAGGGGCCAACCCCTCCCCCTGA

Related Sequences

bmy_05279T0 Protein

Length: 558 aa      View alignments
>bmy_05279T0
MQDAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRKVPALRGDDGRWRPEDLGRLLGEVQAFRGVQESTEARLRELRQCGGGGGGGWGGGRGGSGREGTGFQAFLGSSFLSRALAPPSRPMGRAEEVCCLWTDDHPTGRGFRPAILWGVVTGRTLRCLSTLPRLSSRQNEILWREVVTLRQSHGQQHRVIGKLIQCLFGPLQAGSSSTGAKRKLSLMLDEGCPTPAKFNACPLPGALLQDPYFIQSPLPETTLGLSSPHRARGPIISDIPEDSPSPEGTRLSPSSGGRREKGLALLKEEPASPGGEGEAGLALAPNECDFCVTAPPPLPVAVVQAILEGKGSLSPEGPRSAQQPEPRGPREVPDRGPLDLERGARSPESLLPPMLLRAPPESVEPAGPLDLQPLVPEKGETELAVKGLNSPGPGKDSMLGAPLLLDVQAALGGPALSLPGALTIYSTPESRASYLGPGANPSP*