Part of scaffold_176 (Scaffold)

For more information consult the page for scaffold_176 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRADD ENSTTRG00000010223 (Bottlenosed dolphin)

Gene Details

TNFRSF1A-associated via death domain

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009696, Bottlenosed dolphin)

Protein Percentage 96.95%
cDNA percentage 97.84%
Ka/Ks Ratio 0.24818 (Ka = 0.0134, Ks = 0.0541)

TRADD ENSBTAG00000012642 (Cow)

Gene Details

Tumor necrosis factor receptor type 1-associated DEATH domain protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016776, Cow)

Protein Percentage 89.71%
cDNA percentage 90.03%
Ka/Ks Ratio 0.12388 (Ka = 0.0487, Ks = 0.3935)

TRADD  (Minke Whale)

Gene Details

TNFRSF1A-associated via death domain

External Links

Gene match (Identifier: BACU019683, Minke Whale)

Protein Percentage 98.86%
cDNA percentage 99.11%
Ka/Ks Ratio 0.20619 (Ka = 0.0049, Ks = 0.0238)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 975 bp    Location:682998..686621   Strand:+
>bmy_05282
ATGCTGGAGCGCCCCTGCCCAGGAGGCAAGATGGCGGCTGGGCCAAATGGGCTCGAGGAGTGGGTGGGCAGTGCCTACCTATTTGTGGAGTCCTCGCTGGAGAAGGTGGTCTTGTCGGATGCCTACGCTCACCCGCAGCAGAAAGTGGCGGTGTACAGGGCTCTCCGGACTGCCCTGGCAGAGAGTGGCGGGAGCTCCGACGTGCTGCAGATGCTCAAGATCCACCGCAGCGATCCGCAGCTGATCGTGCAGTTGCGTTTCAGCGGGCGCCAGGCCTGCGGCCGCTTCCTCCGCACCTACCGCGAGGGGGCGCTGCGCGCCGCGCTGCAAGGGTGCTTGGCGGCGGAGCTGACCCTGCACTCCATGCCGCTGCAACTGGAGTTGCGCGCCGGCGCGGAGCAGCTAGATGCCTTGCTGACCGACGAGGAGCGCTGTTTGAATTGCATCTTCGCCCAGAAGCCCGACCGGCTCCGGGATGAGGAACTAACAGAGTTGGAGGATGCGCTCAGGAATCTGACGTGCGGCTCGGAGGGCCAAGGGGGCGACGTGGAGGGCGCTCCGGCCCCCTCGCAGTCCCTGGCACCCTCTCCGTCGGAGGAGAAGCCGCCGCCGCCGCCGCCGCCGTCGTCTGGCCAGACTTTTCTGTTCCAGGGTCAGCCCGTAGTGAACCGGCCGCTGAGCCTGCAGGACCAACAGACGTTCGCGCGCTCAGTGGGCCTCAAGTGGCGCAAGGTGGGGCGCTCCTTGCAGCGCGGCTGTCGTGCATTGAGGGACCCGGCGCTTGACTCACTGGCCTATGAATACGAGCGTGAAGGGCTGTATGAGCAGGCCTTCCAGCTGCTGCGGCGCTTCGTGCAGGCCGAGGGCCGCCGCGCCACGCTGCAGCGCCTGGTGGAGGCGCTCGAGGAGAACGAGCTCACCAGCCTGGCAGAGGACTTGCTGGGCCTCACGAATCCCCATGGCGGCCTGGCCTAG

Related Sequences

bmy_05282T0 Protein

Length: 325 aa      View alignments
>bmy_05282T0
MLERPCPGGKMAAGPNGLEEWVGSAYLFVESSLEKVVLSDAYAHPQQKVAVYRALRTALAESGGSSDVLQMLKIHRSDPQLIVQLRFSGRQACGRFLRTYREGALRAALQGCLAAELTLHSMPLQLELRAGAEQLDALLTDEERCLNCIFAQKPDRLRDEELTELEDALRNLTCGSEGQGGDVEGAPAPSQSLAPSPSEEKPPPPPPPSSGQTFLFQGQPVVNRPLSLQDQQTFARSVGLKWRKVGRSLQRGCRALRDPALDSLAYEYEREGLYEQAFQLLRRFVQAEGRRATLQRLVEALEENELTSLAEDLLGLTNPHGGLA*