Sequence detailsbmy_05302 (Coding sequence)

Part of scaffold_176 (SequenceType object (1))

For more information consult the page for scaffold_176 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CMTM3ENSTTRG00000011072 (Bottlenosed dolphin)

Gene Details

CKLF-like MARVEL transmembrane domain containing 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010494, Bottlenosed dolphin)

Protein Percentage 88.54%
cDNA percentage 90.28%
Ka/Ks Ratio 0.3464 (Ka = 0.011, Ks = 0.0318)

CMTM3ENSBTAG00000047654 (Cow)

Gene Details

CKLF-like MARVEL transmembrane domain-containing protein 3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053978, Cow)

Protein Percentage 95.83%
cDNA percentage 94.79%
Ka/Ks Ratio 0.14034 (Ka = 0.0239, Ks = 0.1706)

CMTM3 (Minke Whale)

Gene Details

CKLF-like MARVEL transmembrane domain containing 3

External Links

Gene match (Identifier: BACU018083, Minke Whale)

Protein Percentage 97.92%
cDNA percentage 98.61%
Ka/Ks Ratio 0.3361 (Ka = 0.0097, Ks = 0.0287)

Additional orthologs identified in other species via the OPTIC pipeline.

CMTM3 (Human)   Cmtm3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 291 bp    Location:1112535..1104453   Strand:-
Raw sequence 
>bmy_05302
ATGCAGCTGAACGACAAGTGGCAGGGCTTGTGCTGGCCCATGATGGACTTCCTACGCTGTGTCACAGCGGCCCTCATCTACTTCGCCATCTCCATCACAGCTGTGGCCAAATACTCGGACGGAGCTTCCAAAGCAGCCGGGGTGTTTGGCTTCTTTGCCACCATCGTGTTTGCAATTGACTTCTACCTGATCTTTAACGATGTAGCCAAATTCCTCAAACAAGGGGACTCCGCAGATGAGACCACAGCTGACAAGGCAGAAGAAGAGAATTCCGACTCTGACTCCGACTGA

Related Sequences

bmy_05302T0 SequenceType object (3)

Length: 97 aa      View alignments
>bmy_05302T0
MQLNDKWQGLCWPMMDFLRCVTAALIYFAISITAVAKYSDGASKAAGVFGFFATIVFAIDFYLIFNDVAKFLKQGDSADETTADKAEEENSDSDSD*