Part of scaffold_186 (Scaffold)

For more information consult the page for scaffold_186 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000010014 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009495, Bottlenosed dolphin)

Protein Percentage 94.58%
cDNA percentage 96.53%
Ka/Ks Ratio 0.70988 (Ka = 0.0158, Ks = 0.0223)

TMED6 ENSBTAG00000007616 (Cow)

Gene Details

Transmembrane emp24 domain-containing protein 6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010015, Cow)

Protein Percentage 90.83%
cDNA percentage 93.75%
Ka/Ks Ratio 0.34447 (Ka = 0.045, Ks = 0.1307)

TMED6  (Minke Whale)

Gene Details

transmembrane emp24 protein transport domain containing 6

External Links

Gene match (Identifier: BACU018144, Minke Whale)

Protein Percentage 73.74%
cDNA percentage 78.03%
Ka/Ks Ratio 0.61146 (Ka = 0.2312, Ks = 0.378)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 726 bp    Location:651409..656559   Strand:+
>bmy_05317
ATGTTCCCCTTGCTCTTTGGGGCTGGACTGGTGGTTCTGAACCTAGTGAGCTCTGCAAGGAGCCAGAAGACAGAACCTCTTAGTGGCTCTGGGGACCAGCCCCTCTTCCGTGGTGCGGATCGATACGACTTTGCCATCATGATCCCTCCAGGAGGCACAGAATGCTTTTGGCAATTTGCCCACCAGACTGGATACTTCTATTTCAGTTATGAGGTTCAGCGGACACTGGGAATGTCACATGACCGGCATGTTGCTGCCACTGCACATACCCCACAGGGTTTCCTTATAGACACCTCTAAGAATGTTCGGGGCCAGATTAACTTCTCTACCCAAGAGACAGGTTTTTATCAGCTTTGTCTAACAAATCAGCAAAATCGCTTTGGTTCTGTGCAAGTATACCTCAATTTTGGAGTCTTCTATGAGGGGCCTGAGATGGACCACAAAGAGAAGAATGAAAGAAAACAACTGAATGATACTTTGGATGCAATTGAGAAGAGTACACGAAAGGTGCAGAACAATATCTTTCACATGTGGCGATACTACAACTTCGCTCGCATGAGAAAAATGGCTGACTTTTTCCTACTCCAGTCAAACTATAACTATGTGAATTGGTGGTCGACAGCCCAGAGCCTTGTTATTATTCTTTCTGGGATCCTGCAGCTGTATTTCTTGAAGCGTCTCTTCAACATCCCAACGACTACAGACACAAAGAAGTCAAGATGCTAA

Related Sequences

bmy_05317T0 Protein

Length: 242 aa      View alignments
>bmy_05317T0
MFPLLFGAGLVVLNLVSSARSQKTEPLSGSGDQPLFRGADRYDFAIMIPPGGTECFWQFAHQTGYFYFSYEVQRTLGMSHDRHVAATAHTPQGFLIDTSKNVRGQINFSTQETGFYQLCLTNQQNRFGSVQVYLNFGVFYEGPEMDHKEKNERKQLNDTLDAIEKSTRKVQNNIFHMWRYYNFARMRKMADFFLLQSNYNYVNWWSTAQSLVIILSGILQLYFLKRLFNIPTTTDTKKSRC*