Sequence detailsbmy_05321 (Coding sequence)

Part of scaffold_186 (SequenceType object (1))

For more information consult the page for scaffold_186 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000009990 (Bottlenosed dolphin)

Gene Details

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009478, Bottlenosed dolphin)

Protein Percentage 95.6%
cDNA percentage 96.06%
Ka/Ks Ratio 0.36772 (Ka = 0.0295, Ks = 0.0802)

VPS4AENSBTAG00000001659 (Cow)

Gene Details

vacuolar protein sorting-associated protein 4A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000055660, Cow)

Protein Percentage 94.72%
cDNA percentage 92.28%
Ka/Ks Ratio 0.12401 (Ka = 0.0333, Ks = 0.2682)

Additional orthologs identified in other species via the OPTIC pipeline.

VPS4A (Human)   Vps4a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1464 bp    Location:682904..672289   Strand:-
Raw sequence 
>bmy_05321
GCCCTCGGACTCGGCTCCCCTGCAAGCGGCCACCCTACCCGCGCCCAGCGCCGACCCGCCGGGCTCCCCGCGCCGGACCAGCTTCTCGGCTCTCGGGGCCGGACCGAGGCCGCAAGCAGCGCCGCGGGGTGTGGGGCGGACCCAGGAGATGAAATGACAACGTCAACCCTCCAGAAAGCCATTGATCTGGTGACAAAAGCCACAGAAGAGGATAAAGCCAAGAACTATGAGGAGGCACTCCGGCTCTACCAGCATGCTGTGGAGTATTTCCTGCACGCTATCAAATATGAGGCACACAGCGACAAGGCCAAGGAGAGCATTCGAGCCAAGTGCATGCAGTACCTAGACCGGGCAGAGAAGCTGAAGGATTATTTACGAAATAAAGAGAAGCATGGCAAGAAGCCAGTCAAAGAGAACCAGAGCGAGAGCAAGGGCAGTGATAGTGACAGTGAAGGGGATAATCCAGAGAAAAAGAAATTGCAAGAACAGCTGATGGGTGCTGTCGTGATGGAGAAGCCCAACATTCGGTGGAATGACGTGGCCGGGCTGGAGGGGGCCAAGGAGGCCCTCAAAGAAGCTGAAGAAGCTTACTTCAGTTCATTCTTTCTCGTAGGCAAGCGTACCCCTTGGCGGGGAATACTGCTCTTTGGACCCCCTGGCACAGGGAAATCCTACCTGGCCAAAGCAGTGGCAACGGAGGCCAACAACTCTACCTTCTTCTCTGTGTCCTCCTCAGACTTGATGTCTAAGTGGTTGGGGGAGAGTGAGAAGCTAGTCAAGAACCTGTTTGAGCTGGCCAGGCAGCACAAGCCCTCCATCATCTTCATCGATGAGGTGGATTCGCTCTGCGGATCCCGCAACGAAAATGAGAGTGAGGCCGCCCGAAGGATCAAAACGGAGTTCCTGGTCCAGATGCAGGGGGTGGGGAATAACAATGATGGGACTCTGGTACTTGGTGCCACAAACATCCCGTGGGTTTTGGATTCAGCCATTAGAAGGAGGTTTGAAAAGCGAATTTATATCCCATTGCCGGAGGAGGCTGCCCGTGCCCAGATGTTCCGGTTGCATCTGGGGAGCACTCCTCACAACCTCACAGACGCCAACATCCACGAGCTGGCCCGGAAGACGGAAGGCTACTCGGGCGCAGACATCAGCATCATCGTGCGGGATTCCCTCATGCAGCCCGTGAGGAAAGTACAGTCAGCAACACACTTCAAAAAGGTCTGTGGCCCTTCCCGCACCAACCCTAGCATTATGATCGACGACCTCCTGACCCCATGCTCACCAGGGGACCCAGGGGCCATGGAGATGACTTGGATGGATGTCCCCAGTGACAAACTCTTAGAGCCTGTGGTTTGCATGTCGGACATGCTCCGGTCTTTGGCCACCACTCGGCCCACCGTGAATGCAGATGACCTCGTGAAAGTGAAGAAATTCTCAGAGGACTTTGGACAGGAGAGTTAA

Related Sequences

bmy_05321T0 SequenceType object (3)

Length: 488 aa      View alignments
>bmy_05321T0
ALGLGSPASGHPTRAQRRPAGLPAPDQLLGSRGRTEAASSAAGCGADPGDEMTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCMQYLDRAEKLKDYLRNKEKHGKKPVKENQSESKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAEEAYFSSFFLVGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCGPSRTNPSIMIDDLLTPCSPGDPGAMEMTWMDVPSDKLLEPVVCMSDMLRSLATTRPTVNADDLVKVKKFSEDFGQES*