Part of scaffold_186 (Scaffold)

For more information consult the page for scaffold_186 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CIRH1A ENSTTRG00000016000 (Bottlenosed dolphin)

Gene Details

cirrhosis, autosomal recessive 1A (cirhin)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015164, Bottlenosed dolphin)

Protein Percentage 99.7%
cDNA percentage 99.01%
Ka/Ks Ratio 0.04192 (Ka = 0.0014, Ks = 0.0332)

CIRH1A ENSBTAG00000006347 (Cow)

Gene Details

cirhin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008333, Cow)

Protein Percentage 94.61%
cDNA percentage 92.13%
Ka/Ks Ratio 0.11009 (Ka = 0.0281, Ks = 0.2552)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2061 bp    Location:829752..793700   Strand:-
>bmy_05323
ATGGGTGAATTTAAGGTCCATCGAGTACGTTTCTTTAATTATGTTCCATCAGGGATCCGCTGTGTGGCTTACAATAACCAGTCAAACAGATTGGCTGTTTCACGAACAGATGGCACTGTGGAAATTTATAATTTGTCAGCAAACTACTTTCAGGAGAAATTTTTCCCAGGTCATGAGTCTCGGGCTACGGAAGCTCTGTGCTGGGCAAACGGACAGCGACTGTTTAGTGCTGGACTCAATGGAGAGATTATTGAGTATGATTTGCAGGCGTTAAACATCAAGTATGCTATGGATGCCTTTGGAGGACCCATTTGGAGCATGGCTGCCAGCCCCAATGGCTCTCAACTTTTGGTTGGCTGCGAAGATGGATCTGTGAAACTATTTCAGATCACCCCAGACAAAATCCAGTTTGAAAGAAATTTTGATCGTCAGAAAAGTCGAATCCTGAGCCTCAGCTGGCATCCCGCTGGTACCCACATTGCAGCTGGCTCCATAGACTACATTAGTGTGTTTGATGTCAAATCAGGGAGCGCTATTCATAAGATGCTTGTGGATAGGCAGTATATGGGTGTGTCTAAGCGGAAGTGTATCATATGGGGCGTGGCCTTCCTGTCCGATGGCACCGTCATAAGTGTGGACTCTGCTGGGAAGGTGCAGTTCTGGGACTCAGCTACCGGGACGCTTGTGAAGAATCATCTCATCGCAAATGCTGACGTGCAGTCCATTGCCATATCTGATCAAGAAGACAGTTTCGTGGTGGGCACAGCCGAGGGGACAGTGTTCCATTTTCAGCTGGTCTCTGTGACTTCCAACAGCAGTGAGAAGCAGTGGGTGCGGACAAAGCCATTTCAGCATCACACTCACGACGTGCGAGCCGTGGCCCACAGCCCCATAGCACTGATATCTGGAGGCACAGACACCCACTTAGTCATTCGTCCTCTCATGGAGAAGGTGGAGGTAAAGAATTATGATGCTGCTCTCCGAAAAATCACTTTTCCCCATCGACGTCTCGTTTCCTGTGCAAAAAAGAAGCAGCTTCTCCTCTTCCAGTTTGCTCATCACTTGGAACTTTGGCGACTGGGATCCACAGTTGCAACAGGAAAGAATGGGGATACCCTTCCACTCTCTAAAAATGCAGATCACTTACTTCACCTCAAGACAAAGGGTCCTGAGAACATTATCTGCAGCTGTATCTCCCCATGTGGAAGTTGGATAGCCTATTCTACAGCTTCTCGGTTTTTTCTCTATCGTTTGAATTATGAACATGACAACATAAACCTCCAAAGGGTTTCCAAAATGCCAGCGTTCCTTCGCTCTGCCCTTCAGATTTTGTTTTCTGAGGATTCAACGAAGCTCTTTGTGGCATCAAATCAAGGGTCTCTGCATGTCATTCGGCTGCTGGAGGGAAGCTTCAAGCACCTGCATACTTTTCAGCCTCAATCAGGGACAGTGGAGTCCATGTGCCTTTTGGCAGTCAGTCCAGATGGAAATTGGCTAGCTGCGTCAGGTACCAGTGCTGGAGTCCATGTGTACAACGTGAAACAACTAAAGCTTCACTGCACAGTGCCTGCTTACAATTTCCCTGTGACTGCTCTGGCCATCGCCCCCAATACCAACAACCTTGTCATTGCTCATTCTGACCAGCAGGTATTTGAGTACAGCATTCCAGACAAACAGTATACACAATGGAGCCGGACCATCCAGAAGCAGGGGTTTCATCATCTTTGGCTCCAAAGGGATACTCCCATCACACATATCAGTTTTCATCCCAAGAGACCAATGCACATCCTTCTCCATGATGCGTACATGTTCTGCATCATCGACAAGTCGTTGCCTCTTCCAAATGACAAAACCTTACTCTACAATCCACTGCCTCCCACAAATGAATCAGATATCATCAGGAGGCGCACAGCTCATGCCTTTAAAATTTCTAAGAAATATAAGCCTCTACTCTTCATGGATCTTTTGGATGAAAGAACACTAGTGGCGGTAGAACGGCCTCTGGATGACATCATTGCTCAGCTGCCACCACCCATCAAAAAGAAGAAATTTGGGACCTAA

Related Sequences

bmy_05323T0 Protein

Length: 687 aa      View alignments
>bmy_05323T0
MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHESRATEALCWANGQRLFSAGLNGEIIEYDLQALNIKYAMDAFGGPIWSMAASPNGSQLLVGCEDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHPAGTHIAAGSIDYISVFDVKSGSAIHKMLVDRQYMGVSKRKCIIWGVAFLSDGTVISVDSAGKVQFWDSATGTLVKNHLIANADVQSIAISDQEDSFVVGTAEGTVFHFQLVSVTSNSSEKQWVRTKPFQHHTHDVRAVAHSPIALISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLVSCAKKKQLLLFQFAHHLELWRLGSTVATGKNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGSWIAYSTASRFFLYRLNYEHDNINLQRVSKMPAFLRSALQILFSEDSTKLFVASNQGSLHVIRLLEGSFKHLHTFQPQSGTVESMCLLAVSPDGNWLAASGTSAGVHVYNVKQLKLHCTVPAYNFPVTALAIAPNTNNLVIAHSDQQVFEYSIPDKQYTQWSRTIQKQGFHHLWLQRDTPITHISFHPKRPMHILLHDAYMFCIIDKSLPLPNDKTLLYNPLPPTNESDIIRRRTAHAFKISKKYKPLLFMDLLDERTLVAVERPLDDIIAQLPPPIKKKKFGT*