Part of scaffold_186 (Scaffold)

For more information consult the page for scaffold_186 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMPD3 ENSTTRG00000011555 (Bottlenosed dolphin)

Gene Details

sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010958, Bottlenosed dolphin)

Protein Percentage 98.32%
cDNA percentage 97.81%
Ka/Ks Ratio 0.08126 (Ka = 0.0072, Ks = 0.0883)

SMPD3  (Minke Whale)

Gene Details

sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)

External Links

Gene match (Identifier: BACU001467, Minke Whale)

Protein Percentage 21.43%
cDNA percentage 38.19%
Ka/Ks Ratio 0.08774 (Ka = 1.1474, Ks = 13.0767)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1971 bp    Location:1443621..1456515   Strand:+
>bmy_05331
ATGGTTTTGTACACGACCCCCTTTCCCAACAGCTGTCTGTCTGCCCTGCACGCCGTGTCCTGGGCCCTCATCTTCCCATGCTACTGGCTGGTGGACCGGCTCCTGGCCTCCTTCATACCCACCACCTACGAGAAGCGCCAGCGGGCGGATGACCCGTGCTACCTCCAGCTGCTCTGCACCGTGCTCTTCACGCCCGTCTACCTGGCCCTCCTGGTCGCCTCGCTGCCCTTTGCGCTCCTTGGGTTCCTCCTCTGGTCCACCCTGCAGTCGGCCCGCCGGCCCTACGTCTACTCCCGGCTGGAGGACAAGGGCCCAGCCGGCGGGGCGGCCCTGCTCAGCGAATGGAAGGGTACGGGTCCTGGCAAAAGCTTCTGCTTCGCCACTGCCAACCTCTGCCTCCTCCCGGACTCGCTGGCCAGGCTCAACAACGTTTTCAACACCCAAGCCCGGGCCAAAGAAATCGGCCAGAGAATCCGCAACGGGGCCAGTAGGCCCCAGATCAAAATCTACATCGACTCACCCACCAACACCTCCATCAGCGCGGCCAGCTTCAGCAGCCTGGTGTCACCGCAGGGCAGTGATGGCGTGGCCCGGGCCGTCCCTGGGAGCATTAAGAGGACGGCCTCTGTGGAGTACAAGGGTGATGGTGGGCGTCACCCTAGCGATGAGGCTGCCAACGGCCTGGCCTCCGGGGACCCAGCTGACGGCGGCAGCCTTGAGGACGCCTGCATCGTGCGCATCAGTGGCGACGAGGGGGGCCGGCCCCCCGAAGCCGTCGACCCCCCCGCTGGGGGCCAGGCCAGGAACGGGGCTGGTGGGGGCCCACGGGGCCAGACACCCAACCAGAGTCAGCGGGATGGGGACTCGGGGAGCCTGGGCAGCCCCTCGGCCTCCAGGGAGTCCCTGGTGAAGGCGCGGGCCGGGGCCGACGGCGGCGGTGGGGAGCCAGGCGCCAACAGCAAGCTCCCGTACAAGGCCTCGGTGGCAAAGAAGGCAGCCGTGCGCAGGAGGCGCCACCCGGACGAGGCTTTTGACCACGAGGTCTCAGCCTTCTTTCCCGCCAACCTGGACTTCCTGTGCCTGCAGGAGGTGTTTGACAAGCGGGCGGCCGCCAAGTTGAAAGACCAGCTGCACGGCTACTTCGAGTACATCCTCTATGACGTCGGGGTCTATGGCTGCCACGGCTGCTGCAGCTTCAAGTGTCTCAACAGCGGCCTCTTCTTTGCCAGCCGCTACCCCATCATGGACGTGGCCTATCACTGTTACCCCAACGGGCGGTCCTCCGACAGCCTGGCCTCGAAGGGAGCTCTGTATCTCAAGGTGCAGGTAGGAAATACACCTCACGACCAAAGAATTGTCGGGTACATCTCCTGCACACACCTGCACGCCCTGCCAGAGGACAGTGACATCCGGTGTGAGCAGCTGAACATGCTTCAGGACTGGCTGGCTGATTTCCGAAAATCTACCTCCTCGTCCAGCGCAGCCAACCCCGAGGAGCTGGTGGCGTTTGACGTCGTCTGCGGAGATTTTAACTTTGACAACTGCTCCTCTGACGACAAGCTGGAGCAGCAGCACCCCCTGTTTACACGTTACAAGGACCCCTGCCGCCTGGGGCCTGGGGAGGAGAAGCTGTGGGCAATCGGTACCCTATTGGACAAGGACGGTCTCTACGACGAGGAAGTGTGCACCCCTGACAATCTGCAAAAGGTCCTGGAGAGCGAGGAAGGTCGTCGCGAGTACCTCGCTTTCCCCACCAGCAAGAGCCCCGGGGGAGGCCAGAAGGGACGCAAAGAGCTGCTGAAGGGCAACGGCAGGCGCATTGACTACATGCTGCACGGGGAGGAGGGGCTGTGCCCAGACTGGAAGGCCGAGGTGGAAGAATTCAGTTTCATCACCCAGCTGTCAGGCCTGACAGACCACCTCCCGGTGGCCATGCGACTGATGGTGTCTGCGGGGGAGGAGGAGGCATAA

Related Sequences

bmy_05331T0 Protein

Length: 657 aa     
>bmy_05331T0
MVLYTTPFPNSCLSALHAVSWALIFPCYWLVDRLLASFIPTTYEKRQRADDPCYLQLLCTVLFTPVYLALLVASLPFALLGFLLWSTLQSARRPYVYSRLEDKGPAGGAALLSEWKGTGPGKSFCFATANLCLLPDSLARLNNVFNTQARAKEIGQRIRNGASRPQIKIYIDSPTNTSISAASFSSLVSPQGSDGVARAVPGSIKRTASVEYKGDGGRHPSDEAANGLASGDPADGGSLEDACIVRISGDEGGRPPEAVDPPAGGQARNGAGGGPRGQTPNQSQRDGDSGSLGSPSASRESLVKARAGADGGGGEPGANSKLPYKASVAKKAAVRRRRHPDEAFDHEVSAFFPANLDFLCLQEVFDKRAAAKLKDQLHGYFEYILYDVGVYGCHGCCSFKCLNSGLFFASRYPIMDVAYHCYPNGRSSDSLASKGALYLKVQVGNTPHDQRIVGYISCTHLHALPEDSDIRCEQLNMLQDWLADFRKSTSSSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHPLFTRYKDPCRLGPGEEKLWAIGTLLDKDGLYDEEVCTPDNLQKVLESEEGRREYLAFPTSKSPGGGQKGRKELLKGNGRRIDYMLHGEEGLCPDWKAEVEEFSFITQLSGLTDHLPVAMRLMVSAGEEEA*