Sequence detailsbmy_05331 (Coding sequence)

Part of scaffold_186 (SequenceType object (1))

For more information consult the page for scaffold_186 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMPD3ENSTTRG00000011555 (Bottlenosed dolphin)

Gene Details

sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010958, Bottlenosed dolphin)

Protein Percentage 98.32%
cDNA percentage 97.81%
Ka/Ks Ratio 0.08126 (Ka = 0.0072, Ks = 0.0883)

SMPD3 (Minke Whale)

Gene Details

sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)

External Links

Gene match (Identifier: BACU001467, Minke Whale)

Protein Percentage 21.43%
cDNA percentage 38.19%
Ka/Ks Ratio 0.08774 (Ka = 1.1474, Ks = 13.0767)

Additional orthologs identified in other species via the OPTIC pipeline.

SMPD3 (Cow)   SMPD3 (Human)   Smpd3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1971 bp    Location:1443621..1456515   Strand:+
Raw sequence 
>bmy_05331
ATGGTTTTGTACACGACCCCCTTTCCCAACAGCTGTCTGTCTGCCCTGCACGCCGTGTCCTGGGCCCTCATCTTCCCATGCTACTGGCTGGTGGACCGGCTCCTGGCCTCCTTCATACCCACCACCTACGAGAAGCGCCAGCGGGCGGATGACCCGTGCTACCTCCAGCTGCTCTGCACCGTGCTCTTCACGCCCGTCTACCTGGCCCTCCTGGTCGCCTCGCTGCCCTTTGCGCTCCTTGGGTTCCTCCTCTGGTCCACCCTGCAGTCGGCCCGCCGGCCCTACGTCTACTCCCGGCTGGAGGACAAGGGCCCAGCCGGCGGGGCGGCCCTGCTCAGCGAATGGAAGGGTACGGGTCCTGGCAAAAGCTTCTGCTTCGCCACTGCCAACCTCTGCCTCCTCCCGGACTCGCTGGCCAGGCTCAACAACGTTTTCAACACCCAAGCCCGGGCCAAAGAAATCGGCCAGAGAATCCGCAACGGGGCCAGTAGGCCCCAGATCAAAATCTACATCGACTCACCCACCAACACCTCCATCAGCGCGGCCAGCTTCAGCAGCCTGGTGTCACCGCAGGGCAGTGATGGCGTGGCCCGGGCCGTCCCTGGGAGCATTAAGAGGACGGCCTCTGTGGAGTACAAGGGTGATGGTGGGCGTCACCCTAGCGATGAGGCTGCCAACGGCCTGGCCTCCGGGGACCCAGCTGACGGCGGCAGCCTTGAGGACGCCTGCATCGTGCGCATCAGTGGCGACGAGGGGGGCCGGCCCCCCGAAGCCGTCGACCCCCCCGCTGGGGGCCAGGCCAGGAACGGGGCTGGTGGGGGCCCACGGGGCCAGACACCCAACCAGAGTCAGCGGGATGGGGACTCGGGGAGCCTGGGCAGCCCCTCGGCCTCCAGGGAGTCCCTGGTGAAGGCGCGGGCCGGGGCCGACGGCGGCGGTGGGGAGCCAGGCGCCAACAGCAAGCTCCCGTACAAGGCCTCGGTGGCAAAGAAGGCAGCCGTGCGCAGGAGGCGCCACCCGGACGAGGCTTTTGACCACGAGGTCTCAGCCTTCTTTCCCGCCAACCTGGACTTCCTGTGCCTGCAGGAGGTGTTTGACAAGCGGGCGGCCGCCAAGTTGAAAGACCAGCTGCACGGCTACTTCGAGTACATCCTCTATGACGTCGGGGTCTATGGCTGCCACGGCTGCTGCAGCTTCAAGTGTCTCAACAGCGGCCTCTTCTTTGCCAGCCGCTACCCCATCATGGACGTGGCCTATCACTGTTACCCCAACGGGCGGTCCTCCGACAGCCTGGCCTCGAAGGGAGCTCTGTATCTCAAGGTGCAGGTAGGAAATACACCTCACGACCAAAGAATTGTCGGGTACATCTCCTGCACACACCTGCACGCCCTGCCAGAGGACAGTGACATCCGGTGTGAGCAGCTGAACATGCTTCAGGACTGGCTGGCTGATTTCCGAAAATCTACCTCCTCGTCCAGCGCAGCCAACCCCGAGGAGCTGGTGGCGTTTGACGTCGTCTGCGGAGATTTTAACTTTGACAACTGCTCCTCTGACGACAAGCTGGAGCAGCAGCACCCCCTGTTTACACGTTACAAGGACCCCTGCCGCCTGGGGCCTGGGGAGGAGAAGCTGTGGGCAATCGGTACCCTATTGGACAAGGACGGTCTCTACGACGAGGAAGTGTGCACCCCTGACAATCTGCAAAAGGTCCTGGAGAGCGAGGAAGGTCGTCGCGAGTACCTCGCTTTCCCCACCAGCAAGAGCCCCGGGGGAGGCCAGAAGGGACGCAAAGAGCTGCTGAAGGGCAACGGCAGGCGCATTGACTACATGCTGCACGGGGAGGAGGGGCTGTGCCCAGACTGGAAGGCCGAGGTGGAAGAATTCAGTTTCATCACCCAGCTGTCAGGCCTGACAGACCACCTCCCGGTGGCCATGCGACTGATGGTGTCTGCGGGGGAGGAGGAGGCATAA

Related Sequences

bmy_05331T0 SequenceType object (3)

Length: 657 aa      
>bmy_05331T0
MVLYTTPFPNSCLSALHAVSWALIFPCYWLVDRLLASFIPTTYEKRQRADDPCYLQLLCTVLFTPVYLALLVASLPFALLGFLLWSTLQSARRPYVYSRLEDKGPAGGAALLSEWKGTGPGKSFCFATANLCLLPDSLARLNNVFNTQARAKEIGQRIRNGASRPQIKIYIDSPTNTSISAASFSSLVSPQGSDGVARAVPGSIKRTASVEYKGDGGRHPSDEAANGLASGDPADGGSLEDACIVRISGDEGGRPPEAVDPPAGGQARNGAGGGPRGQTPNQSQRDGDSGSLGSPSASRESLVKARAGADGGGGEPGANSKLPYKASVAKKAAVRRRRHPDEAFDHEVSAFFPANLDFLCLQEVFDKRAAAKLKDQLHGYFEYILYDVGVYGCHGCCSFKCLNSGLFFASRYPIMDVAYHCYPNGRSSDSLASKGALYLKVQVGNTPHDQRIVGYISCTHLHALPEDSDIRCEQLNMLQDWLADFRKSTSSSSAANPEELVAFDVVCGDFNFDNCSSDDKLEQQHPLFTRYKDPCRLGPGEEKLWAIGTLLDKDGLYDEEVCTPDNLQKVLESEEGRREYLAFPTSKSPGGGQKGRKELLKGNGRRIDYMLHGEEGLCPDWKAEVEEFSFITQLSGLTDHLPVAMRLMVSAGEEEA*