Sequence details bmy_05352 (Coding sequence)

Part of scaffold_185 (Scaffold)

For more information consult the page for scaffold_185 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NUP214 ENSTTRG00000003927 (Bottlenosed dolphin)

Gene Details

nucleoporin 214kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003698, Bottlenosed dolphin)

Protein Percentage 92.49%
cDNA percentage 92.92%
Ka/Ks Ratio 0.29571 (Ka = 0.0168, Ks = 0.0567)

NUP214 ENSBTAG00000021896 (Cow)

Gene Details

nuclear pore complex protein Nup214

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029190, Cow)

Protein Percentage 92.71%
cDNA percentage 90.89%
Ka/Ks Ratio 0.15434 (Ka = 0.0403, Ks = 0.2608)

NUP214  (Minke Whale)

Gene Details

nucleoporin 214kDa

External Links

Gene match (Identifier: BACU016205, Minke Whale)

Protein Percentage 97.65%
cDNA percentage 97.92%
Ka/Ks Ratio 0.34612 (Ka = 0.0137, Ks = 0.0395)

Genome Location

Sequence Coding sequence

Length: 3324 bp    Location:31363..77234   Strand:+
Raw sequence 
>bmy_05352
ATGGGAGACGAAATGGATGCCGTGATCCCCGAGCGGGAGATGAAGGATTTTCAGTTTAGAGCACTGAAGAAGGTGAGAATCTTTGACTCCCCTGAGGAGTTGCCCAAGGAACGCTCGAATCTGCTTGCCGTGTCCAACAAGTATGGCCTGGTCTTCGCTGGTGGAGCCAGTGGGTTGCAGATTTTTCCTACTAAAAATCTTCTTATTCAGAATAAACCTGGAGATGATCCCAATAAGATAGTTGATAAAGTTCAAAGCTTGCTAGTTCCTATGAAATTCCCGATACATCACCTGGCCCTGAGCTGTGATAACCTCACACTTTCCGTGTGCATGATGTCCAGTGAATATGGTTCCATTATTGCTTTTTTTGATGTTCGCACTTTCTCAAATGAGGCCAAACAGCAGAAACGCCCGTTTGCGTATCATAAGCTCCTGAAAGATGCAGGAGGCATGGTGATCGATATGAAGTGGAACCCTACTGTTTCCTCCATGGTGGCAGTTTGTCTGGCTGATGGCAGCATTGCTGTCCTACAAATCACAGAGACAGTGAAAGTGTGTGCGACTCTTCCTTCCACAGTAGGGGTAACATCTGTCTGCTGGAGCCCCAAAGGAAAGCAGCTGGCAGTGGGGAAACAGAATGGAACTGTGGTCCAGTATCTTCCTACTTTGCAGGAAAAAAAAGTCATTCCTTGTCCTCCATTTTATGAGGCAGATCATCCTGTCAGAGTTCTGGATGTGCTGTGGATCGGTACATATGAATTCACAATAGTATATGCTGCTGCGGACGGGACCTTGGAAACTGCTCCAGATGTGGTGATGGCTCTACTCCCGAAAAAAGAAGAAAAGCACCCAGAAGTGTTTGTGAACTTTATGGAGCCCTGCTACGGCAGCTGTACAGAGAGGCAGCATCATTACTACCTCAGCTACATTGAAGAATGGGATTTAGTGCTGGCAGCATCTGCGGCTTCAACAGAAGTTAGTATCCTCGCTCGACAAAGCAGCCAGAGTAATTGGGAATCTTGGCTGCTGGAGGATTCTAGCCGAGCTGAACTGCCTGTGACAGACAAGAGTGATGATTCCTTGCCCATGGGAGTTGCCATAGATTACACCAACCAAGTGGAAATCACCATCAATGATGAGAAGACTCTTCCTCCTGCTCCAGTTCTTATGTTACTTTCAACAGATGGTGTGCTTTGTCCATTTTACATGATCAATCAAAATCCTGGTGTTAGGTCCCCCCTCAGGACACCAGAGCGGCTCTCATTGGAAGGAGAGCGACAACCCAAGTCATCAGGAAGTACTCCTACTACCCCCACCTCCTCTCAGGCCCCGCAGAAGCTCGATGCCGCAGCAGCTGTAGCTCCTGCCTCTGTTCTGCCTTCATCACCGGCTGCTCCCACCTCCACCTTCTCTTTGCCTTCTGCCATTGGAGCCCCTGCTGTGTTCTCCTTTGGTTCTTCATCCTTGAAGTCGTCTGGTTCTGTCACTGGGGAGGCCCCTTCGTGTTCCAGTGCCTCTGACAATTCCAAAGCAGCCTTGGGCCCTGGAGCATCCTCCTTCTCTTTTGCTCCTCCTCCTCCTCCTCAAGCCTCCCTCGTACTCACCCCAGCGGCCTCTCCCATGGCACCCTCAGCTGCCTCATTCTCCTTTGGATCATCGGGATTTAAGCCTACCCTGGAAAGCACGCCAGTGCCAAGCGTGTCTGCTCCAAACACAGGAATGAAGCCCACCTTCCCACCATCAGCCTCTGCAGTCAAGGTCAACCTTAGCGAAAAGTTCACAGCCGCGGCCACCTCTGCTCCGGTTCACAACTCACAGAGCGCACCCTCAATGCTGCCATTCTCCTCGGCCTCCAAGCCAGCATCCTCTGGACCTCTCAGCCACCCTGCACCTCTCTCGGCATCATCCAGTTCCTTGTCATCCAAGTCCTCAGTCTCTTCCTCAGTATCGGCAGGGCGATCTGCTCAGGGGAGTCCCAGTCCAGTGCCATCAATGGTACAGAAATCACCCAGGATAACCCCTCCAGTGGCCAAGTCCGGCTCTCCCCAGGCAAAATCACTTCAGCCTCCTGTTACAGAAAAGCAGGGACATCAGTGGAAAGAGTCAGATCCTGTGATGGCTGGAATCGGGGAGGAGGTCACTCACTTTGAGAAGGAGTTGGAAGAGTTGAAAGCCCGGACTTCCAAAGCCTGTTTCCAAGTGGGCACTTGTGCGGAGATGAGGATGCTGAGAACAGAATCAGATGACCTGCACGCCTTTCTTTTGGAGATTAAAGAGACCACAGAGTCTCTTCACGGAGATATAAGTACCCTGAAAACAACTTTACTTGAGGGCTTTGCTGGTGTTGAAGAAGCCAGAGAACAAAATGAGAGAAACCGTGACTCTGGGTATCTGCACTTGCTCTATAAGAGGCCGCTGGACCCCAGGAGTGAGGCTCAACTCCAGGAAATTCGGCGCCTTCATCAACGCCTGCTTGTGCCAGAGCGAGAGACGCTGTTTAACACCCTTGCCAACAACCGGGAAATCATCAACCAACAGAGGAAGAGGCTGAATCACCTGGTGGATAGTCTCCAGCAGCTCCGTCTTTACAACCAAACCTCCCATTTTGACAGTGACCTCGAAAGCCTGCGCAATGCTTTGTTGAAAACAACCATAGACTCTCAAACCAAACCCTTGCCCAAAGTCCCAGCTAAACTGTCCCCCGTGAAACAGGCACAGCTGAGAAACTTCTTGGCCAAGAGGAAGACCCCACCGGTGAGATCTACTGCTCCAGCCAGCCTGTCTCGGTCAGCTTTCCTGTGTCAGAGGTATTATGAAGACTTGGATGAAGTCAGCTCAACGTCATCCATTTCCCAGTCTCTGGAAAGTGAAGACACACGGGCATCCTGTAAGGATGACGATGCAGTGGTCCAGGTTCCCCGGCATGCTCCCGTGGTTCGAACGCCTTCCATCCAGCCCAGTCTTTTGCCCCAGGCGACTCCTTTTGCTAAATCTCACCTGATTCATGGTTCGCCAGGTGTGATGGGAACGTCAGTGTCTACACCTGCTAGCAAAATTATTCCCCAAGGGGCTGATAGCACAATGCTTGCAACAAAAACCGTGAAGCATGGCGCTCCTGGCCCTTCCCACCCCATCTCTGCTCCCCAGGCGGCCGCTGCGGCAGCCCTGAGACGGCAGATGGCCAGTCAGGCGCCAGCTGTCAGTACTTTGACCGAATCAACTTTGAAGAATGTCCCTCAGGTGGTAAATGTGCAGGAATTGAAGAATAATCCTACGGCCCCCTCTGCAGCGATCGGGTATGTTACTACTTTTCAGTGTGTTTGA

Related Sequences

bmy_05352T0 Protein

Length: 1108 aa      View alignments
>bmy_05352T0
MGDEMDAVIPEREMKDFQFRALKKVRIFDSPEELPKERSNLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQSLLVPMKFPIHHLALSCDNLTLSVCMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVSSMVAVCLADGSIAVLQITETVKVCATLPSTVGVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYEADHPVRVLDVLWIGTYEFTIVYAAADGTLETAPDVVMALLPKKEEKHPEVFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSSQSNWESWLLEDSSRAELPVTDKSDDSLPMGVAIDYTNQVEITINDEKTLPPAPVLMLLSTDGVLCPFYMINQNPGVRSPLRTPERLSLEGERQPKSSGSTPTTPTSSQAPQKLDAAAAVAPASVLPSSPAAPTSTFSLPSAIGAPAVFSFGSSSLKSSGSVTGEAPSCSSASDNSKAALGPGASSFSFAPPPPPQASLVLTPAASPMAPSAASFSFGSSGFKPTLESTPVPSVSAPNTGMKPTFPPSASAVKVNLSEKFTAAATSAPVHNSQSAPSMLPFSSASKPASSGPLSHPAPLSASSSSLSSKSSVSSSVSAGRSAQGSPSPVPSMVQKSPRITPPVAKSGSPQAKSLQPPVTEKQGHQWKESDPVMAGIGEEVTHFEKELEELKARTSKACFQVGTCAEMRMLRTESDDLHAFLLEIKETTESLHGDISTLKTTLLEGFAGVEEAREQNERNRDSGYLHLLYKRPLDPRSEAQLQEIRRLHQRLLVPERETLFNTLANNREIINQQRKRLNHLVDSLQQLRLYNQTSHFDSDLESLRNALLKTTIDSQTKPLPKVPAKLSPVKQAQLRNFLAKRKTPPVRSTAPASLSRSAFLCQRYYEDLDEVSSTSSISQSLESEDTRASCKDDDAVVQVPRHAPVVRTPSIQPSLLPQATPFAKSHLIHGSPGVMGTSVSTPASKIIPQGADSTMLATKTVKHGAPGPSHPISAPQAAAAAALRRQMASQAPAVSTLTESTLKNVPQVVNVQELKNNPTAPSAAIGYVTTFQCV*