Sequence detailsbmy_05369 (Coding sequence)

Part of scaffold_185 (SequenceType object (1))

For more information consult the page for scaffold_185 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SETXENSTTRG00000012141 (Bottlenosed dolphin)

Gene Details

senataxin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011529, Bottlenosed dolphin)

Protein Percentage 87.44%
cDNA percentage 91.02%
Ka/Ks Ratio 0.65111 (Ka = 0.0407, Ks = 0.0626)

SETXENSBTAG00000024822 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000040529, Cow)

Protein Percentage 83.8%
cDNA percentage 88.73%
Ka/Ks Ratio 0.37058 (Ka = 0.0899, Ks = 0.2426)

SETX (Minke Whale)

Gene Details

senataxin

External Links

Gene match (Identifier: BACU016195, Minke Whale)

Protein Percentage 97.1%
cDNA percentage 98.24%
Ka/Ks Ratio 0.47675 (Ka = 0.0135, Ks = 0.0283)

Genome Location

Sequence SequenceType object (2)

Length: 5421 bp    Location:1074833..1047977   Strand:-
Raw sequence 
>bmy_05369
ATGAGCACATGTTGTTGGTGTACGCCAGGTGGTATTTCCACCATTGACTTCCTGCAACGCTATGCATCCGAGACCCACTCCAGTGAATTTCAAACAGCTGATGAAGACCTCTGCTACTGCTTAGAGTGTGTGGCTGAATACCACAAAGCAAGGGACGAATTGCCATTCTTACATAAGGTTTTATGGGAATTAGAAACCTCACGTCTCATAAATCACTTTGAAAAGGCCATGAAGGCAGAAATTGGAGATGATGACGAGTTATATATAGTAGACAACAATGGAGAGGCACAGCCGTTTGACTTTACTGGCCAAGACTTTGAAAATAAGCTTCGAGTTCCTCTTCTTGAAATACTGAAATATCCTTATTTGCTTTTACATGAGCGTGTTAATGAATTATGCGTTGAAGCACTTTGCCGGATGGAACAAGCTAATTGCTCCTTTCAGGTTTTTGACAAACATCCAGGGATCTATTTGTTTTTGGTCCATCCCAATGAAATGGTTCGGCGCTGGGCTATCCTGACTGCAAGAAACTTGGGAAAAGTGGACAGAGATGATTATTATGACTTACAGGAGGTTTTGACTTGCCTTTTTAAAGTTATTGAGTTGGGGCTTTTAGAAAGTCCAGACATTTATACTTCTTCTGTCCTTGAGAAGGGTAAACTGATTCTTCTGCCTTCACACATGTATGATACTGCCAACTACAAAAACTATTGGTTAGGTATTTGCATGTTGCTGACCATTCTTGAGGAGCAAGCCATGGATTCACTGTTGTTGGGCTCAAACAAACAGAATGATTTTATGCAATCAATACTTCACACCATGGAGAGGCAATCAGATGATGATAGTGTGGATCCTTTCTGGCCAGCGTTACACTGTTTCATGGTGATTCTGGATCGCCTTGGATCTAAGGTCTGGGGTCAACTTATTGATCCTATTGAGGCATTTCAAACCATTATCAACAACGTGAGCTACAATAAAGAGATCCAGAATATACGGAACAGCTCTGTGAGGACCAAGTTAGAACCGGAGTCATATTTGGATGATGTGACTTGCAGCCAGATTGTATACAATTATAACCCTGAAAAGACCAAAAAGGATTCAGGGTGGAGATCAGCCATTTGCCCAGATTATTGTCCTAACATGTATGAAGAAATGGAAACATTAGCTAATGTGCTTCAGTCAGATATCGGTCAAGACATGCGTGTTCATAACAGCACGTTTCTGTGGTTCATCCCTTTTGTGCAGTCCCTCATGGATCTTAAGGATCTGGGTGTGGCTTATATAGTGGAGGTTATTCATCATCTGCATTCTGAAGTCAAAGACGTCCTCAACCAGACAGACGCCGTGTGTGACACAGTCACTGAGTTTTTCCTTCTCATTTTGGTGTCAGTGATTGAACTTCATAGAAACAAAAAGTGTTTGCATTTGCTGTGGGTTAGTTCCCAGCAGTGGGTGGAAGCCGTTGTAAAATGTGCCAAGCTTCCCACCACCGCGTTTGCACGGAGTTCTGAGAAGTCGTCTGGAAACTGCTCCAAAGGCACAACAATGATAACGTCTCTGTCATTGCATTCAGTGCCATCTAACTCTGTACAACTTGCTTGTGTGCAGCTGATCAGAAGTCTCCTTAAAGAAGGCTATCAGCTTGGGCAGCAGACTCTTTGTAAGCGGTTCTGGGATAAGCTCAACTTATTCCTGCGAGGAAATTTATCTTTAGGTTGGCAGTTGACTAGTCAGGAAACCCATGAGTTACAAACTTGTTTAAAGCAAATTATTAGAAACATAAAATTCAAAGTACCTCAATGTAGCACTTCTGTGGATCTGACTCCTCCATGTAAAGCGCCTCCTGCATCTTATAATAAAGAAGAAAGTGAACAAACAGGGAAGAAGTCTAAAAAAGACAGGCACTGTCTGGAAAACTCCAGCCCAACATTCTCTAAAGAACCAATGAAAGCTGATGCATGTCAAGTGCAAGAGAGTATTTTCAGCAAAGCAAATAATGCCATAGAAGAGGATAATGAGCAAACTTATATAAAAGATTTGAAACTCGAAGACCATTTCTCAGCTGAGTTGTGCTTGAAGCCGAGTAGTAAAAGGCTTGTTAGTGAAAGAGSTCGAGGCCAAGTTAAAATAAGTACAGGGAAGCATAAGTCTGTAAAAGAGAATTCCTCATATACCCCACAGAATTGTACTTCAAGAAATGGTCCAGAAAAGGTATTTGACAGAGGAATAATAACATCAACACGTTTGTTGACTGATTCTAGCAATGACTCTCTGGAAAAGGTGTCCACATCAAATGAGGATTTCTCTTTAAAGGATGATGCTCTTGGCAAAACCTCAAAAGCAAAAACTAAGGCACATAAAGATGAAATCTGTGCTAAGTTATCACATGTAATAAAAAAGCAGCACAGGAAGAGTATCACTTTAGAGGAAAACCTGACTGTATCTAGCATCGAAAGTTTCTATTCAAAGAAAGATACAGGAGGTCAGAAAGGATATGGCTTCATACACAATCCCTCTTTAGGCCCTAATGGTATTCTGGATGATAAAAATGGAGAACAAAAATCTGAAAACAGTTTATTGCTGAAAAAGAAACAAGTAAAGGAAGAAGAGTTAGGCATTTTCTCTACCCCTGAAATCAGTTGTCAAATACTGGAATGTCATGTTGATAATAAAGATTTGGTCTCATTTACAGAAACGACCAATATTTTTGTGGAGAAAACACCTCCCTTTAAAGATCCTGTGACTGGACTTGAATCAAGAGATATGGAAATTAGCAAGAGTACCGTTCAGTTTTCTTCTAATTTAAGAGAACAGGCCCTTAGCATCAGTCATAATTCTGACACCTTAACAGATTCTCAGATAGACAGAGACCTCCACAAATTATCTTTAATAGCTCAAGCCAGTGTTATTAAGTTCCCATCAGATTCAACTAAAAAAAAAAGTTTATCCCAGCTACAAAGAAAAGTTAAAGATGACAGAAGATGTTTCACAGCCAACAAAAATAGTGTCAGGGAAACCTGCTGTGGACAGGTGATTATTATTTCAGATTCTGATGAAGATGATGATGATGAAAGAATTGTGGGTTTTAAGAAACACATTAAACAGGATAAAACATGCATTGAGAAAGAATGTCCAGAGCAGCATACTTCAATAGCTAACACAAATGTGGAACAGAAGGTAATAAAGGAAGAAAATACAAGGTCCCTTTTGCAGTTTGAGGAATCTGATTCTCAGTTTTTTGAGTTTGAAAGTCCATGTGAAGTGTTTTCAGTTTGGCAAGATCAGAAACCAGACAACAAGAATTCAGTTCAAGAGAATGAAGAAAATTCGTGCTTGACTCATGTAGGTGATAYCACAAATGATTGGGGTTATGGTACAGATTATGTACCTGAAGAGGTCATTAAAAAAGCAGCAGAGGGCATTGAGGAACACGCAGAACCACACAGTAGTAGTATTTCTGTTGAGAAATTTTGTGAAATTGAAGTGAAGAAACCCAAGAGAAAACGATACAAGAAAGCTGCTATGGCTGAAGATCCTGTAAGGCCTTCATCTCCTGTCAAAAGTGAGGACCAGTCTGATATTCTTAATGAGAGAGATGTGACTGAAAATGATTTTAAAAGTATAGACATAAGGACTACAACTCCCAATTCAAGCGTTCAGAGAACCACTACTGTTTCCCTGAAGAAGTCTCCACCAAAGCTTCGCACTTATTCCAAACCTGTTAGGAGAGTCTCACTTTCTAAAACTCCTAAAAAAACACATTCGGATACCAAAACAGGACAGAGTAAAAGTTTAAATTACCTAAGTTGTAGAACAACTCCTGCTATAGTGCCACCAAAGAAATTTCGCCAGTGTCCTGAACCAACGTCAACGGTTGAGAAACTTGGTCTGAAAAAGGCTCCTCGTAGGGCATTTGAGTTGTCCCAGCGATCTTTGGAGTGTTTAGCTCAGTTACGTGACCATGGCAAAACTGTTGGAGTAGTTGATACCCGGAAAAAGACTAAGTTAATTTCTCCTCAGACTCTCTCTGTCAAAAATAATAAGAAACTGCTGACGAGTCAAGACCGTCAGTTGCGAAGGCAGAGGAGACCCAAATCACAACAAAACAGACAAGGATGTTTTGATTATCAAAGTACAGATACAGCACGAGCAGGGCCACATGCAGCACAGAATTCTGACAAATTTGTGCCAGAATCAGATACATCAGATTATAGTTATAAAAGAGGAGCTGAGGTAACTGCTAAAAATAAGGAAAAACAGTTAATAAAATGTGTGTCTTCTGAAACAGAACCCACGAAAGCAAAATATGTTTCTCAGGTAGCTGATGACACTTGTCTTTTGAACCAGTGTAATTCTGTAGTGTTAAATGGAGAAATACCAACAAATGAAATAGTTGTTTCTACCTCGGGGGACCCTTTAGGTGGAGGTGACCTAACAGTACATCATTTAGATGTGGCAGCTTTGAAAGAAGGAGAGCCTGAATCCAGCAGTGACATAGAGGAAGATAATATATTTTTAACACAATGTGATCCTGAAGATATGGATTTATGTTCACAAATGGAGAAAGAGAATGATAAACTCATTGAAGTAGTTCATGGAAAAGATACAGTCCAGGTAGAAGAAGATTCTGTGAGTCGGCCTCAGTTGGAATCTTTGAGTAGCACAAAATGTAAGTACAAAGATTGTGTTGAAACACTGAAAAACCAGGGTGAATACTGTTCAAAACACTCTGAAGCTAAAGCAGCAGATGAAGATATATTTCGTAAACCTGGCTTGCCTCTCTCTGCATCTAAACCTTCGAGACCTTCCACTGCTAAGATTTTTAGCTCCAGTAGTACTTCACGAATTGCTGGTCTTTCCAAGTCTTTGGAAAATACGTCAGCACTCCTACCAACTCTGAAAAATAAGTCAAGTGGGGTACAATCTGTTTTGAAAGTACCACAGCCAGCCTCTCTGGTGTCTCAGAAGCCAGTGGCTGAAGTGAAGGGTTTGTGCAACGTTCTCCGTTCTCATACTCCAAATAATTCCAACAGGCAAGGCTACAAAGTTCCATTTTGTGAAAACAGATCTTTTTTGGCTACCTCTCCAGTAAACATTCTCTTGTCAGCMCAGTCCATCTCTGACACCTTCGTTAAAGAGATCTTAAAATGGAAATACGAAATGTTTGTGAACTTTGATCATTGCGGACCCCCATCAACTCTTTGTCAGTCCATTGCAAGACCTGTGCCTGTGAGATTTCAAGATTGTGGAGATTATTTTAATGTGTTTTTCCCTTTGATGATACTGAATACTTTTGAAACAGTGGCACAGGAATGGATCAGCTCTCCAAACAAAGAGAAATTCCATCAGTTGCATTTACGAAAATTTCCTGCTGATTATAAAAAATACTGGGAGTTTGTGGGTAAGTTCTTTCTTATGTAA

Related Sequences

bmy_05369T0 SequenceType object (3)

Length: 1807 aa      View alignments
>bmy_05369T0
MSTCCWCTPGGISTIDFLQRYASETHSSEFQTADEDLCYCLECVAEYHKARDELPFLHKVLWELETSRLINHFEKAMKAEIGDDDELYIVDNNGEAQPFDFTGQDFENKLRVPLLEILKYPYLLLHERVNELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNEMVRRWAILTARNLGKVDRDDYYDLQEVLTCLFKVIELGLLESPDIYTSSVLEKGKLILLPSHMYDTANYKNYWLGICMLLTILEEQAMDSLLLGSNKQNDFMQSILHTMERQSDDDSVDPFWPALHCFMVILDRLGSKVWGQLIDPIEAFQTIINNVSYNKEIQNIRNSSVRTKLEPESYLDDVTCSQIVYNYNPEKTKKDSGWRSAICPDYCPNMYEEMETLANVLQSDIGQDMRVHNSTFLWFIPFVQSLMDLKDLGVAYIVEVIHHLHSEVKDVLNQTDAVCDTVTEFFLLILVSVIELHRNKKCLHLLWVSSQQWVEAVVKCAKLPTTAFARSSEKSSGNCSKGTTMITSLSLHSVPSNSVQLACVQLIRSLLKEGYQLGQQTLCKRFWDKLNLFLRGNLSLGWQLTSQETHELQTCLKQIIRNIKFKVPQCSTSVDLTPPCKAPPASYNKEESEQTGKKSKKDRHCLENSSPTFSKEPMKADACQVQESIFSKANNAIEEDNEQTYIKDLKLEDHFSAELCLKPSSKRLVSERXRGQVKISTGKHKSVKENSSYTPQNCTSRNGPEKVFDRGIITSTRLLTDSSNDSLEKVSTSNEDFSLKDDALGKTSKAKTKAHKDEICAKLSHVIKKQHRKSITLEENLTVSSIESFYSKKDTGGQKGYGFIHNPSLGPNGILDDKNGEQKSENSLLLKKKQVKEEELGIFSTPEISCQILECHVDNKDLVSFTETTNIFVEKTPPFKDPVTGLESRDMEISKSTVQFSSNLREQALSISHNSDTLTDSQIDRDLHKLSLIAQASVIKFPSDSTKKKSLSQLQRKVKDDRRCFTANKNSVRETCCGQVIIISDSDEDDDDERIVGFKKHIKQDKTCIEKECPEQHTSIANTNVEQKVIKEENTRSLLQFEESDSQFFEFESPCEVFSVWQDQKPDNKNSVQENEENSCLTHVGDXTNDWGYGTDYVPEEVIKKAAEGIEEHAEPHSSSISVEKFCEIEVKKPKRKRYKKAAMAEDPVRPSSPVKSEDQSDILNERDVTENDFKSIDIRTTTPNSSVQRTTTVSLKKSPPKLRTYSKPVRRVSLSKTPKKTHSDTKTGQSKSLNYLSCRTTPAIVPPKKFRQCPEPTSTVEKLGLKKAPRRAFELSQRSLECLAQLRDHGKTVGVVDTRKKTKLISPQTLSVKNNKKLLTSQDRQLRRQRRPKSQQNRQGCFDYQSTDTARAGPHAAQNSDKFVPESDTSDYSYKRGAEVTAKNKEKQLIKCVSSETEPTKAKYVSQVADDTCLLNQCNSVVLNGEIPTNEIVVSTSGDPLGGGDLTVHHLDVAALKEGEPESSSDIEEDNIFLTQCDPEDMDLCSQMEKENDKLIEVVHGKDTVQVEEDSVSRPQLESLSSTKCKYKDCVETLKNQGEYCSKHSEAKAADEDIFRKPGLPLSASKPSRPSTAKIFSSSSTSRIAGLSKSLENTSALLPTLKNKSSGVQSVLKVPQPASLVSQKPVAEVKGLCNVLRSHTPNNSNRQGYKVPFCENRSFLATSPVNILLSAQSISDTFVKEILKWKYEMFVNFDHCGPPSTLCQSIARPVPVRFQDCGDYFNVFFPLMILNTFETVAQEWISSPNKEKFHQLHLRKFPADYKKYWEFVGKFFLM*