Sequence detailsbmy_05374 (Coding sequence)

Part of scaffold_185 (SequenceType object (1))

For more information consult the page for scaffold_185 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GTF3C4ENSTTRG00000014097 (Bottlenosed dolphin)

Gene Details

general transcription factor IIIC, polypeptide 4, 90kDa

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013367, Bottlenosed dolphin)

Protein Percentage 91.97%
cDNA percentage 92.87%
Ka/Ks Ratio 0.33412 (Ka = 0.018, Ks = 0.0539)

GTF3C4ENSBTAG00000004091 (Cow)

Gene Details

general transcription factor 3C polypeptide 4

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000005344, Cow)

Protein Percentage 93.47%
cDNA percentage 90.56%
Ka/Ks Ratio 0.0918 (Ka = 0.0316, Ks = 0.3437)

GTF3C4 (Minke Whale)

Gene Details

general transcription factor IIIC, polypeptide 4, 90kDa

External Links

Gene match (Identifier: BACU016190, Minke Whale)

Protein Percentage 98.81%
cDNA percentage 98.3%
Ka/Ks Ratio 0.16044 (Ka = 0.0058, Ks = 0.0363)

Additional orthologs identified in other species via the OPTIC pipeline.

GTF3C4 (Human)   Gtf3c4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2454 bp    Location:1354568..1376076   Strand:+
Raw sequence 
>bmy_05374
ATGAATACGGCCAAGGCCCGGGTGGGGCCCGCGGTCGACCGGCCTGCGCCACCCGAGGAGAAGGAAGGCGACGCGGGTGGGAGGGAGCCGGGGGCGGACGCGGCCCCCGGGCCCAGCGCCGCGTTCCGCCTCCTGGTGACTCGGCGGGAACCGGCGGTGAAGCTGCAGTATGCGGTGAGCGGCCTGGAGCCGCTGGTGTGGTCCGATGACCACCGCGTGTCGGTGTCCACGGCCCGCAGCATCGCTGTGCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCTGCGCCTCTCAACAGCTGCTTTCTCAAAGTTGGCTCAAAAACGGAAGTTGCTGAGTGTAAGGAGAAATTTGCCACCTCTGAAGACCCCACAGTCAGTCAGACTTTCATGTTGGACAGGGTGTTCAACCCTGAGGGGAAGGCTTTGCCACCATTGAGAGGATTCAAGTACACTAGCTGGTCCCCCATGGGCTGTGATGCTAATGGCAGGTGCCTCCTGGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCTAACCTCAACAGACTGCAGTGGGTCCAGCTGGTCGATCTGACGGAGATTTATGGAGAACGTCTTTATGAGACCAGTTACAGGTTCTCTAAAAGTGAGGCCCCAGAAGGGAATCTCAGGGATTTTGCTGAGTTTCAGAGGAGACACAGCATGCAGACACCAGTCAGGATGGAGTGGTCAGGCATCTGTACCACTCAGCAGGTCAAGCATAACAACGAGTGCCGCGACGTGGGCAGCGTGCTCCTGGCCGTCCTCTTTGAAAACGGTAACATTGCTGTGTGGCAGTTTCAGCTACCGTTTGTAGGAAAGGAATCTATCTCTTCATGCAACACAATTGAGTCAGGAATCAACTCTCCTAGTGTTTTGTTTTGGTGGGAATATGAGCACAATAATCGGAAAATGAGCGGCCTTATTGTGGGGAGTGCTTTTGGACCTGTAAAAATTCTTCCTGTCAATCTCAAAGCAGTTAAAGGCTATTTCACGTTAAGGCAGCCTGTCGTCTTGTGGAAAGAAATGGACCAGTTGCCAGTACAGAGCATCAAGTGTGTACCGCTGTATCACCCTTACCAGAAGTGTAGTTGTAGCTTAGTGGTGGCCGCAAGAGGACCCTATGTGTTTTGGTGTCTTCTTCTGATCTCCAAAGCAGGTCTGAATGTTCACAATTCTCACGTCACAGGCCTGCACTCACTGCCGATCGTCTCCATGACTGCAGACAAGCAGAATGGGACGGTATATACCTGTTCCAGTGAYGGGAAGGTGAGGCAGCTGATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAAACTCTCGGATGTGTTTGGCTCAGTGAGGACACACGGGATAGCCGTGAGCCCCTTTGGTGCGTACCTGGCCGTCATTACCACTGAGGGCATGGTCAACGGCCTCCATCCCGTTAACAAAAACTACCAGGTTCAGTTCRTTACTCTCAAGAGCTTTGAAGARGCAGCTGCTCAGCTTCTGGAATCKTCAGTTCAAAATCTCTTTAAGCAGGTAGATTTAATAGACCTAGTACGTTGGAAGATTTTAAAAGATAAACATATCCCTCAGTTTTTACAAGAAGCTTTGGAAAAAAAGATTGAAAGCAGTGGGGCCACCTATTTTTGGCGTTTCAAACTCTTCCTCCTGAGGATTTTATACCAGTCGATGCAGAAAACCGCTTCAGAAGCCTTATGCAGACCCATCCTTGAGGACTCAAAAATCTTACTGGTTGACTCACCTGGGACGGGCAGTGCTGAGGGTGAGCAGCCKGAAGAAGGCACTTCCTCCGAACAGACGAATAAGCARGGCCTTCAGGAGAGGAGCAAAGAAGGTGGTCCGGAGGGCCCCACAGATGACTCACTCACTCAGTCTGGAGACATTGGAGGCCGAGAGCCAATGGAAGAGAAACTCCTTGAAATCCAAGGGAAAATTGAAGCTGTGGAAATGCACTTGACCCGGGAGCACATGAAGCGAGTCTTAGGCGAAGTATACCTGCACACCTGGATCACAGAAAACACTAGCATCCCCACCCGGGGACTCTGTAACTTTTTAATGTCTGATGAAGAGTATGATGACAGAACCGCACGGGTGCTGATCGGACACATCTCAAAGAAGATGAACAAGCAAACTTTCCCGGAGCACTGTAGTTTGTGTAAAGAGATTTTGCCGTTCACAGATCGCAAACAGGCGGTCTGTTCCAATGGCCACATTTGGCTCCGGTGCTTCTTAACGTACCAGTCCTGCCAGAGTTTGATATACAGGAGGTGTTTGCTCCATGACAGCATTGCCCGCCATCCAGCCCCGGAAGATCCTGACTGGATTAAGAGGTTACTGCAAAGCCCCTGCCCTTTCTGTGATTCTCCTGTCTTCTGA

Related Sequences

bmy_05374T0 SequenceType object (3)

Length: 818 aa      View alignments
>bmy_05374T0
MNTAKARVGPAVDRPAPPEEKEGDAGGREPGADAAPGPSAAFRLLVTRREPAVKLQYAVSGLEPLVWSDDHRVSVSTARSIAVLELICDVHNPGQDLVIHRTSVPAPLNSCFLKVGSKTEVAECKEKFATSEDPTVSQTFMLDRVFNPEGKALPPLRGFKYTSWSPMGCDANGRCLLAALTMDNRLTIQANLNRLQWVQLVDLTEIYGERLYETSYRFSKSEAPEGNLRDFAEFQRRHSMQTPVRMEWSGICTTQQVKHNNECRDVGSVLLAVLFENGNIAVWQFQLPFVGKESISSCNTIESGINSPSVLFWWEYEHNNRKMSGLIVGSAFGPVKILPVNLKAVKGYFTLRQPVVLWKEMDQLPVQSIKCVPLYHPYQKCSCSLVVAARGPYVFWCLLLISKAGLNVHNSHVTGLHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLIKLSDVFGSVRTHGIAVSPFGAYLAVITTEGMVNGLHPVNKNYQVQFXTLKSFEEAAAQLLESSVQNLFKQVDLIDLVRWKILKDKHIPQFLQEALEKKIESSGATYFWRFKLFLLRILYQSMQKTASEALCRPILEDSKILLVDSPGTGSAEGEQPEEGTSSEQTNKQGLQERSKEGGPEGPTDDSLTQSGDIGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLMSDEEYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRCFLTYQSCQSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF*