Sequence detailsbmy_05410 (Coding sequence)

Part of scaffold_189 (SequenceType object (1))

For more information consult the page for scaffold_189 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMED5ENSTTRG00000006974 (Bottlenosed dolphin)

Gene Details

transmembrane emp24 protein transport domain containing 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006591, Bottlenosed dolphin)

Protein Percentage 63.16%
cDNA percentage 73.93%
Ka/Ks Ratio 0.90849 (Ka = 0.3305, Ks = 0.3638)

TMED5ENSBTAG00000020180 (Cow)

Gene Details

Transmembrane emp24 domain-containing protein 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000032097, Cow)

Protein Percentage 95.72%
cDNA percentage 94.83%
Ka/Ks Ratio 0.12929 (Ka = 0.0202, Ks = 0.1564)

Additional orthologs identified in other species via the OPTIC pipeline.

TMED5 (Human)   Tmed5 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 564 bp    Location:1307550..1324715   Strand:+
Raw sequence 
>bmy_05410
ATGGGCGACAAGATCTGGCTGCCCTTCCCGGTGGTCCTCTTGGCCTCTCTGCTGCTGCCTGGGGCGGTCGGCTTCACGCCCTCCTTAGACAGCGACTTCACGTTCACTCTTCCGGCCGGCCAGAAGGAGTGTTTCTACCAGCCCATGCCCCTGAAGGCCTCGCTGGAGATCGAGTACCAAGTTTTAGATGGAGCAGGATTAGATATTGATTTCCATCTTGCCTCTCCAAAAGGAAGAACCTTAGTTTTTGAACAAAGAAAATCAGATGGAGTTCACACGATAGAGACCGAAGGCGGTGACTACATGTTCTGCTTTGATAATACATTCAGCACCATTTCTGAGAAGGAGTCCATCAACAGTATCAAGTCCAGACTAAGCAAAAGTGGTCATATCCAAACTCTGCTTAGAGCATTTGAAGCTCGTGATCGAAACATACAAGAAAGCAACTTTGATAGAGTAAATTTCTGGTCTATGGTTAATTTAGTGGTAATGGTGGTAGTGTCAGCCATTCAAGTATATACGCTGAAGAGTCTATTTGAAGATAAGAGGAAAAGTAGAACTTAA

Related Sequences

bmy_05410T0 SequenceType object (3)

Length: 188 aa      View alignments
>bmy_05410T0
MGDKIWLPFPVVLLASLLLPGAVGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGLDIDFHLASPKGRTLVFEQRKSDGVHTIETEGGDYMFCFDNTFSTISEKESINSIKSRLSKSGHIQTLLRAFEARDRNIQESNFDRVNFWSMVNLVVMVVVSAIQVYTLKSLFEDKRKSRT*