Sequence detailsbmy_05415 (Coding sequence)

Part of scaffold_191 (SequenceType object (1))

For more information consult the page for scaffold_191 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ERCC4ENSTTRG00000009357 (Bottlenosed dolphin)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008876, Bottlenosed dolphin)

Protein Percentage 96.29%
cDNA percentage 96.79%
Ka/Ks Ratio 0.37674 (Ka = 0.0198, Ks = 0.0525)

ERCC4ENSBTAG00000021773 (Cow)

Gene Details

DNA repair endonuclease XPF

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000043645, Cow)

Protein Percentage 91.76%
cDNA percentage 91.72%
Ka/Ks Ratio 0.20754 (Ka = 0.0442, Ks = 0.2128)

ERCC4 (Minke Whale)

Gene Details

excision repair cross-complementation group 4

External Links

Gene match (Identifier: BACU012945, Minke Whale)

Protein Percentage 95.71%
cDNA percentage 96.46%
Ka/Ks Ratio 0.31736 (Ka = 0.0241, Ks = 0.076)

Additional orthologs identified in other species via the OPTIC pipeline.

ERCC4 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 2589 bp    Location:130928..165783   Strand:+
Raw sequence 
>bmy_05415
ATGGAGCCGGGCTTGCCGGCTCGAGAGACAGCTATGGCGCCGCTGCTGGAGTATGAGCGGCAGCTGGTGCTGGAACTACTGGAGGCGGACGGGCTGGTAGTGTGCGCCCGCGGGCTCGGCGCGGACCGGCTCCTCTACCACTTCCTCCGGCTGCACTGCCACCCGGCGTGCCTGGTGCTGGTGCTCAACACGCAGCCGGCCGAGGAGGAGTATTTTATCAATCAGCTGAAGATAGAAGGAGTTGAACATCTCCCTCGCCGTGTAACAAATGAAATCACAAGTAGCAGTCGCTATGAGGTGTACACACAAGGCGGTGTGATATTTGCAACAAGTCGAATACTTGTGAAAAACAAACATGGTTTTATTAAAGCTTTCACAGACAACGCTATTGCCTTTGACACCGGCTTTTGTCAYGTGGAGAGAGTGATGAGAAATCTTTTCATAAGGAAGCTGTATCTGTGGCCAAGGTTCCATGTAGCAGTAAACTCATTTTTAGAACAGCATAAACCAGAAGTCGTAGAAATTCATGTTTCTATGACACCTGCCATGCTTGCTATACAGACTGCTATTCTGGACATTCTGAATGCATGTCTAAAGGAACTAAAATGCCATAACCCGTCGCTTGAAGTTGAAGATTTATCTTTAGAAAATGCTATTGGAAAACCTTTTGACAAGACAATCCGCCATTATCTGGATCCTTTGTGGCACCAGCTTGGAGCCAAGACTAAATCCTTGGTTCAGGATTTGAAGATATTACGAACTTTGCTGCAATATCTCTCTCAGTATGATTGCATCACATTTCTTAATCTTCTGGAATCTCTCAGAGCAACAGAGAAGGCATTTGGTCAGAATTCAGGTTGGCTGTTTCTTGACTCCAGCACCTCAATGTTTGTAAATGCTCGAGCAAGGGTTTATCATGTTCCAGATGCCAAAATGAGTAAAAAAGGCAAACTGCCTGAAAAACTGGAGATTAAAGAAGAGCAAGAAACAAGAAAGGAACTGGTCCTAGAAAGCAACCCAAAATGGGAAGCACTCTCGGAAGTATTGAAAGAAATTGAGGCAGAGAATAAGGAGAGTGAAGCCCTTGGTGGTCCAGGACACGTTCTCATTTGCGCAAGTGATGACAGGACCTGTTCCCAGCTGCGAGAGTACATCGCTGTCGGAGCAGAGGCCTTCTTGTTGAGGCTCTACAGGAAAACCTTTGAGAAGGACAGCAAAGCCGAAGACGTGTGGATGAGGTTTAGGAAGGAGGATGGCTCAAAGAGAATTATGAAATCCATCAAAAGGCCCAAAGGCGTCCGAAACAAAGACAGGGCTTCTGCCAAAGAGAGGGCTCTCAAAAAGAAGAAACCAAGGCTGACTTTAACTCAGATGATGGAACAATCTGAAGAACTGGAGGAGGAGGGGGCTGTCGAGGAGGGCTGTCCGAGAGACCTAAGCAGTAGCCCCGAAAGCTGCTTAGAAGAAATTAAGCACGAGGAGTTTGATTTAAACGTGTCCTCTGATGCCGCGTACGGAATCATGAAAGACCCCCTCACCATTATCCACCCACTCCTGGGCTGCAGTGACCCCTACGCTCTGACACGGGTGCTCCACGAGGTGGAGCCAAGATACGTGGTCCTGTACGACGCAGAGCTGACCTTCGTGCGTCAGCTTGAAATTTACAGGGCAAGTTCAACCGAGGAACAACGCTATCTCACTGCTTTGCGGAAAGAAAAGGAAGCTTTTGAAAAACTCATAAGGGAAAAGGCTAGCATGGTTGTCCCTGAAGAAAGAGAAGGAAGAGACGAAACGAACCTCGACCTCGTAAGAGGCTGTGTATCTGCAGGTGCTCCCACCGACACACGCAAAGCCGGCGGCCAGGAACAGAATGGTACCCAGCAAAGTATCGTTGTGGACGTGCGCGAGTTTCGAAGCGAACTCCCATCTCTGATCCACCGTCGGGGCATTGACATTGAGCCAGTGACCTTAGAGGTCGGAGACTACGTGCTGACTCCAGAAATGTGCGTGGAGCGCAAGAGCATCAGTGATTTGATCGGCTCTTTGAACAACGGCCGCCTCTACAGCCAGTGCGTCTCCATGTCCCGCTACTACAAGCGGCCGGTGCTTCTGATCGAGTTCGACCCCACTAAGCCCTTCTCTCTCGTGTCCCGAGGCGCCTTCCATCAGGAGATCTCCGGCGGCGACATCAGCTCCAAGCTCACGCTCCTCACGCTGCACTTCCCCAGGCTCCGCGTCCTCTGGTGCCCCTCCCCGCAYGCCACCGCGGAGCTGTTTGAGGCGCTGAAGCAGAACAAGCCACAGCCGGACGCTGCGACGGCCATGGCCGTGACAGCCGATTCCGAGACCCTCCCCGAGGCAGAGAAGTATAATCCCGGTCCCCAGGACTTCTTGTTAAAAATGCCAGGGGTAAATGCCAAAAACTGTCGCTCCCTGATGACCAACGTTAAGAACATCGCCGAATTAGCRAGCCTGTCCCTCGACAAGCTGGTGCTCCTRYTGGGGAACGTGGCAAATGCCAGGCAGCTCTATGACTTCATTCACACCTCCTACGCAGAGGTCATCTCCAAAGGGAAAATGGAAAAATGA

Related Sequences

bmy_05415T0 SequenceType object (3)

Length: 863 aa      View alignments
>bmy_05415T0
MEPGLPARETAMAPLLEYERQLVLELLEADGLVVCARGLGADRLLYHFLRLHCHPACLVLVLNTQPAEEEYFINQLKIEGVEHLPRRVTNEITSSSRYEVYTQGGVIFATSRILVKNKHGFIKAFTDNAIAFDTGFCHVERVMRNLFIRKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCITFLNLLESLRATEKAFGQNSGWLFLDSSTSMFVNARARVYHVPDAKMSKKGKLPEKLEIKEEQETRKELVLESNPKWEALSEVLKEIEAENKESEALGGPGHVLICASDDRTCSQLREYIAVGAEAFLLRLYRKTFEKDSKAEDVWMRFRKEDGSKRIMKSIKRPKGVRNKDRASAKERALKKKKPRLTLTQMMEQSEELEEEGAVEEGCPRDLSSSPESCLEEIKHEEFDLNVSSDAAYGIMKDPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLVRGCVSAGAPTDTRKAGGQEQNGTQQSIVVDVREFRSELPSLIHRRGIDIEPVTLEVGDYVLTPEMCVERKSISDLIGSLNNGRLYSQCVSMSRYYKRPVLLIEFDPTKPFSLVSRGAFHQEISGGDISSKLTLLTLHFPRLRVLWCPSPHATAELFEALKQNKPQPDAATAMAVTADSETLPEAEKYNPGPQDFLLKMPGVNAKNCRSLMTNVKNIAELASLSLDKLVLLLGNVANARQLYDFIHTSYAEVISKGKMEK*