Part of scaffold_191 (Scaffold)

For more information consult the page for scaffold_191 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PARN ENSTTRG00000002843 (Bottlenosed dolphin)

Gene Details

poly(A)-specific ribonuclease

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002666, Bottlenosed dolphin)

Protein Percentage 87.44%
cDNA percentage 88.79%
Ka/Ks Ratio 0.44034 (Ka = 0.0407, Ks = 0.0924)

PARN ENSBTAG00000018097 (Cow)

Gene Details

Poly(A)-specific ribonuclease PARN

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024087, Cow)

Protein Percentage 89.06%
cDNA percentage 89.13%
Ka/Ks Ratio 0.26645 (Ka = 0.0787, Ks = 0.2953)

PARN  (Minke Whale)

Gene Details

poly(A)-specific ribonuclease

External Links

Gene match (Identifier: BACU012941, Minke Whale)

Protein Percentage 89.06%
cDNA percentage 91.32%
Ka/Ks Ratio 0.64009 (Ka = 0.0849, Ks = 0.1326)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1374 bp    Location:762891..725932   Strand:-
>bmy_05418
ATGGAGATAATCAGGAGCAATTTTAAGAGTAATCTCCACAAAGTGTACCAGGCCATAGAGGAGGCGGACTTCTTCGCCATCGATGGGGAGTTTTCAGGAATCAGCGATGGACCCTCGGTCACCGCATTAACAAATGGTTTTGACACTCCGGAAGAAAGGTATCAGAAGCTTAAAAAGCATTCCATGGACTTTTTGCTGTTTCAGTTTGGCCTTTGCACTTTTAAGTATGACTACACAGATTCAAAGTATATAACAAAGTCTTTTAACTTCTATGTTTTCCCGAAACCCTTCAATAGATCTTCACCAGATGTCAAATTTGTTTGTCAGAGCTCAAGCATTGACTTTCTAGCAAGCCAAGGATTTGATTTTAATAAAGTTTTTCGCAACGGAATTCCATACTTAAACCAGGAAGAAGAAAGACAGTTAAGAGAGCAGTATGATGAAAAACGTTTACAGTCCAATGGTGCAGGCGCTTTGTCGTACGCGTCTCCTAACACTTCAAAATGTCCCGTGACGATTCCTGAGGATCAGAAGAAGTTTATTGACCAAGTGGTAGAGAAAATAGAAGATTTATTACAAAGTGAAGAAAACAAGAACTTGGATTTAGAGCCATGTACTGGGTTCCAAAGAAAACTAATTTATCAGACTTTGAGCTGGAAGTATCCCAAAGGCATTCATGTTGAGACTTTAGAAACTGAAAAGAAAGAGCGCTATATTGTTATCAGCAAAGTAGATGAAGAAGAACGTAAAAGAAGAGAGCAGCAGAAACACGCTAAGGAACAGGAAGAACTGAATGATGCTGTGGGGTTTTCTAGAGTCATTCATGCCATTGCTAATTCGGGGAAACTTGTCATTGGACACAATATGCTCTTGGATGTCATGCACACAGTTCATCAGTTCTACTGCCCTCTGCCCTCGGACTTAAATGAGTTTAAGGAGATGACAACATGTGTCTTCCCCAGACTCTTGGATACAAAATTGATGGCCAGCACACAACCTTTTAAGGATATCATTAACAACACTTCCCTTGCGGAATTGGAAAAGCGGTTAAAAGAGTCACCTTTCAACCCTCCTAAAGTTGAAAGTGCAGAAGGTTTTCCAAGTTATGACACAGCTTCTGAACAGCTCCACGAGGCAGGCTATGATGCTTATATCACAGGACTGTGTTTCATCTCCATGGCAAACTACCTAGTCCTCCAAAGATTCATGTGTCTGCCAGATCAAAGCTCATCGAACCTTTTTTTAACAAAAATTGACCTTTTCAAAAATAATTTATTAAATATATTGGCTAAAAAAAAAGAAAGAAAGAAAACATTATCGAAGGTAGCACATCTCTTCCAAGACAAAGAACTGGTGGTTTTGGAATTTAAATGA

Related Sequences

bmy_05418T0 Protein

Length: 458 aa      View alignments
>bmy_05418T0
MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKHSMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQGFDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGALSYASPNTSKCPVTIPEDQKKFIDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIVISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPSDLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKESPFNPPKVESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLVLQRFMCLPDQSSSNLFLTKIDLFKNNLLNILAKKKERKKTLSKVAHLFQDKELVVLEFK*