Part of scaffold_191 (Scaffold)

For more information consult the page for scaffold_191 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDXDC1 ENSTTRG00000010220 (Bottlenosed dolphin)

Gene Details

pyridoxal-dependent decarboxylase domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009700, Bottlenosed dolphin)

Protein Percentage 97.07%
cDNA percentage 97.75%
Ka/Ks Ratio 0.54305 (Ka = 0.0186, Ks = 0.0343)

PDXDC1 ENSBTAG00000004801 (Cow)

Gene Details

Pyridoxal-dependent decarboxylase domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043763, Cow)

Protein Percentage 94.53%
cDNA percentage 92.58%
Ka/Ks Ratio 0.12882 (Ka = 0.0288, Ks = 0.2232)

PDXDC1  (Minke Whale)

Gene Details

pyridoxal-dependent decarboxylase domain containing 1

External Links

Gene match (Identifier: BACU012936, Minke Whale)

Protein Percentage 98.47%
cDNA percentage 98.77%
Ka/Ks Ratio 0.62373 (Ka = 0.0106, Ks = 0.017)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2361 bp    Location:956856..901828   Strand:-
>bmy_05428
ATGGACGCGCCCCTGGAGAAGATAGCAGACCCTACACTAGCTGAAATGGGAAAAAACTTGAAGGAGGCCATGAAGATGCTAGAGGACAGTCAGAGAAGAACAGAGGAGGAAAATGGAAAGAAGCTCCTATCAGGGGATATTCCAGGGCCACTGCAAGGCAGTGGACAAGACATGGTGAGCATCCTCCAGTTAGTTCAGAATCTGATGCACGGAGATGAAGATGAGGAGCCCCAGAGTACCCGAATCCAGAATATTGGAGAACAAGGTCATATAGCTTTGTTGGGGCACAGTCTGGGAGCTTACATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATACTTTCAGACACTACCTTATGGCTATGCAGAATTTTCAGGTATGAAAATGGCTGTGCTTATTTCCACGAAGAAGAAAGAGAAGGACTTGCAAAGATCTGTAGGCTTGCCATTCATTCCCGTTATGAAGACTTTGTGGTGGATGGGTTCAATGTGTTATATAACAAGACGCCTGTTATATATCTAAGTGCTGCTGCTAGGCCTGGCCTGGGCCAGTACCTCTGTAATCAGCTTGGCTTGCCCTTCCCCTGCTTGTGTCGTGTGCCCTGTAACACTATGTTTGGATCCCAGCATCAGATGGACGTTGCCTTCCTGGAGAAACTGATTAAAGATGACATAGAACGAGGAAAACTGCCCCTGTTGCTTGTTGCAAATGCTGGAACTGCAGCAGTAGGGCACACAGATAAGATTGGGCGTTTGAAAGAGCTCTGTGAGCAGTACGGCATATGGCTCCACGTGAAAGGTGTGAATCTGGCAACATTGGCTCTAGGTTATGTCTCCTCATCAGTGCTGGCTGCAACCAAATGTGACAGCATGACGTTGACTCCAGGCCCATGGCTGGGTTTGCCAGCAGTTCCTGCTGTGACGCTTTATAAGCATGATGATCCTGCCTTGACTTTAGTTGCCGGTCTTACATCAAATAAGCCAACAGACAAGCTCCGTGCCCTGCCACTGTGGTTGTCTTTACAATACTTGGGACTTGATGGGATTGTGGAGAGGATTAAGCATGCCTGTCAGCTGAGTCAGCGATTGCAAGAAAGTTTGAAGAAAGTGAACCACATCAAAATCTTGGTGGAGGATGAGCTCAGTTCGCCAGTGGTGGTGTTCAGATTTTTCCAGGAGTTACCAGGCTCAGATCCAGGACTTAATGCCATCCCAGCGCCCAACATGGCCCCGTCAGCAGTCAGCCAGGAGAGGCACTCCTGCGACGCACTGAACCGCTGGCTGGGAGAACAGCTGAAGCAGCTGGTGCCCGCGAGTGGCCTCACGGTCGTGGATCTGGAGGTGGAGGGCACGTGCGTGCGGTTCAGCCCCCTGACTACTGCGGCAGTTTTAGGAACTCGGGGAGAGGATGTGGATCAGCTCGCAGCCTGCATCCAGAGCAAGCTCCCAGTCCTGACCTGTACGCTGCAGCTGCGAGAGGAGTTCAAGCAGGAGGTGACGGGAACAGCAGGTCTCTTATACGTTGATGACCCAAGCTGGCCTGGAATAGGGGTTGTCAGGTATGAACACGCTAATGATGATAAAAGCAGTTTGAAATCGGATCCAGAAGGGGAAAAAATCCATGCTGGACTCCTGAAAAAGTTAAATGAACTGGAATCTGACCTTACATTTAAAATGGGCCCTGAGTATAAAAGCATGAAGAGCTGTATTTACATTGGCATGGCGAGTGACGACATAGATGTTTCTGAACTAGTGGAGACCATTGCAGTCACAGCCCGAGAAATCGAGGAAAACTCCAGGCTTCTGGAAAACATGACAGAAGTGGTTCGGAAAGGAATTCAGGAAGCTCAGGTTCAACTGCAGAAGGCAAATGAGGAGCGACTTCTGGAAGAGGGGGTGTTACGGCAGATCCCCGTGGTAGGATCCGTGCTGAATTGGTTTTCTCCAGTACAGGCTTCACAAAAGGGAAGAACTTTTAACCTAACGGCAGGCTCCCTGGAGTCCACGGAACACACATACGTGTACAAAGTACAAGGCTCGGGAGTAACACCGCCTCAGACCCCCTCAGGCGCTCGCACTAAACAGAGACTTCCAGGCCAGAAGCCTTTTAAAAGGTCCCTAAGAGGTTCAGATGCTGTGAGCGAGACCAGCTCAGTCAGTCACATCGAGGACTTAGAGAAGATGGAGCACCTGTCGGGTGGGCAAGATGCCTCGGAAGCTAACAGCCCTGAGCGGCACCCAGGGGTGCCCACCCCTCCAGAAGCCGAGCAGACGGGGGCCCTCCAGGACAGGGCCCAGCGCCTGGAAGATGACCGCCCACAGGTAGAAGAGCCAGAGAGCTTAAGATAA

Related Sequences

bmy_05428T0 Protein

Length: 787 aa      View alignments
>bmy_05428T0
MDAPLEKIADPTLAEMGKNLKEAMKMLEDSQRRTEEENGKKLLSGDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSTRIQNIGEQGHIALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKTPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTMFGSQHQMDVAFLEKLIKDDIERGKLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVKGVNLATLALGYVSSSVLAATKCDSMTLTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGIVERIKHACQLSQRLQESLKKVNHIKILVEDELSSPVVVFRFFQELPGSDPGLNAIPAPNMAPSAVSQERHSCDALNRWLGEQLKQLVPASGLTVVDLEVEGTCVRFSPLTTAAVLGTRGEDVDQLAACIQSKLPVLTCTLQLREEFKQEVTGTAGLLYVDDPSWPGIGVVRYEHANDDKSSLKSDPEGEKIHAGLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDIDVSELVETIAVTAREIEENSRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQKGRTFNLTAGSLESTEHTYVYKVQGSGVTPPQTPSGARTKQRLPGQKPFKRSLRGSDAVSETSSVSHIEDLEKMEHLSGGQDASEANSPERHPGVPTPPEAEQTGALQDRAQRLEDDRPQVEEPESLR*