Part of scaffold_191 (Scaffold)

For more information consult the page for scaffold_191 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NDE1 ENSTTRG00000010256 (Bottlenosed dolphin)

Gene Details

nudE nuclear distribution E homolog 1 (A. nidulans)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009731, Bottlenosed dolphin)

Protein Percentage 78.05%
cDNA percentage 79.95%
Ka/Ks Ratio 0.61554 (Ka = 0.134, Ks = 0.2177)

NDE1 ENSBTAG00000015986 (Cow)

Gene Details

nuclear distribution protein nudE homolog 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021265, Cow)

Protein Percentage 82.56%
cDNA percentage 84.11%
Ka/Ks Ratio 0.34472 (Ka = 0.1266, Ks = 0.3671)

NDE1  (Minke Whale)

Gene Details

nudE neurodevelopment protein 1

External Links

Gene match (Identifier: BACU012931, Minke Whale)

Protein Percentage 76.63%
cDNA percentage 80.98%
Ka/Ks Ratio 0.75326 (Ka = 0.2066, Ks = 0.2743)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 777 bp    Location:1189200..1209673   Strand:+
>bmy_05432
ATGAAGCTGAATTGGAGACGCAGCTGCAACAAATTGAAACCAGGAACAGGGACCTGCTGTCAGAAAACAACCGCCTTCGCATGGAGCTGGAAACCATCAAGCTTTGCTTGTCTCTCACCCAGGGCCACGATCATGTCTCTTGAGGACTTTGAACAGCGCTTGAATCAAGCCATTGAAAGAAATGCCTTCCTGGAGAGTGAACTGGACGAGAAGGAGAATCTCCTAGAATCTGTTCAGCGACTGAAGGATGAAGCCAGAGATTTGCGGCAAGAATTGGCTGTGCAGCAAAAGCAGGAGAAACCCAGGACCCCCATGCCCAGCTCTGTGGAAGCTGAAAGGACAGACACAGCTGTACAGGCCACTGGTTCCGTGCCGTCCACCCCCATAGCTCATCGAGGACCCAGCTCTAGCTTAAACACACCTGGGACGTTCAGACGTGGTCTGGACGACTCCACTGGGGGGACCCCCCTCACGCCGGCGGCCCGGATATCTGCCCTCAACATTGTGGGAGACCTGCTGCGGAAAGTGGGGGCTCTGGAGTCCAAACTTGCTTCCTGCCGGAACTTCGTGTATGATCAGTCCCCAAACCGACCCAGTGGCCCAACCTCAGGGTGGGGGAGCAAGAACAGAGACGGCGGCGACAGGCGGCCAGGCAGCACCAGCGTGCCTCTGGGTGACAAAGGGTTGGGAAAACGCCTGGAATTTGGGAAGCCGCCTTCAAATATTTCCTCACCATCGCTGCCGTCAGCCCAGGGTGTAGTCAAGATGTTGCTTTAG

Related Sequences

bmy_05432T0 Protein

Length: 259 aa      View alignments
>bmy_05432T0
MKLNWRRSCNKLKPGTGTCCQKTTAFAWSWKPSSFACLSPRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQELAVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGTFRRGLDDSTGGTPLTPAARISALNIVGDLLRKVGALESKLASCRNFVYDQSPNRPSGPTSGWGSKNRDGGDRRPGSTSVPLGDKGLGKRLEFGKPPSNISSPSLPSAQGVVKMLL*