Part of scaffold_193 (Scaffold)

For more information consult the page for scaffold_193 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRPAP1 ENSTTRG00000015808 (Bottlenosed dolphin)

Gene Details

low density lipoprotein receptor-related protein associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014980, Bottlenosed dolphin)

Protein Percentage 77.22%
cDNA percentage 80.74%
Ka/Ks Ratio 0.29221 (Ka = 0.176, Ks = 0.6023)

BT.87657 ENSBTAG00000000073 (Cow)

Gene Details

alpha-2-macroglobulin receptor-associated protein precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000081, Cow)

Protein Percentage 66.11%
cDNA percentage 74.63%
Ka/Ks Ratio 0.22536 (Ka = 0.2368, Ks = 1.0508)

LRPAP1  (Minke Whale)

Gene Details

low density lipoprotein receptor-related protein associated protein 1

External Links

Gene match (Identifier: BACU004145, Minke Whale)

Protein Percentage 77.78%
cDNA percentage 83.8%
Ka/Ks Ratio 0.51481 (Ka = 0.1649, Ks = 0.3202)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1116 bp    Location:156160..170220   Strand:+
>bmy_05441
ATGGCGTCGCGGAGGGTTCGAACCGGACTGCGCGAGCTCCGGCCGCCGCCGCTACTACTGCTGCTGCTGCTTCTCGGGCCGTGGCCGGCGGCGGGCCACGGCGGCAAGTACTCGCGGGAGAAGAATGAGCCCGAGCCTTCCTCGAAKCGCGAGCCCGGGGGGGAGTTCCGCATGGAGAAGCTGAACCAGCTGTGGGAGAAGGCCCAGCGGCTTGATCTTCCTCCTTTGAAGTTGTCCGAGCTCCATGCTGATCTGAAGATACAAGAACGGGACGAGTTCAAGTGGAAGAAATTGAAGGCTGAAGGCCTGGATGAAGACGGAGAGAAAGAGGCAAAGCTTGCCCGCAGTCTCAACGTCATCCTGGCCAAGTACGGTCTGGACGGGAGGAAGGACGCCCGGGCCGTGAGCAGCAACTTGATCAGCCACGGCCCCGCCGACCACAGCCTGGAGGACCCCCGGCTGGAGAAGCTGTGGAACAAGGCGAAGACCTCTGGGAAGTTCTCCAGTGAAGAACTGGACAAGCTGTGGCGGGAGCTCCAGCATCACAAGGAGAAGGTCCAGGAGTACAACGTCCTGCTGGAGACCCTGAGCAGGACCGAAGAAATCCACGAAAACGTTATCAGTCCCGTGGACGTGAGCCGCGTCAAGGAGGACGCGCTGCAGGTGGGCCACGCCGAGCTGAAGGACAAGCTGCGGGACATCAGCCAGGGCTTCGACCGCCTGCGGAGAGTCAGCCACCAGGGCTACGGCGACCAGGCCGGGTTCGAGGAGCCTCGGGTGCTGGACCTGTGGGACATGGCCCAGTCAGCCAACTTCACCGAGAAGGAGCTCGAGGCCTTTCGGGTAGGGACGGCCTCTCAGCCACGGGGTCTGGCGGCATCTCTCCCAGTGGACTTCCTGATAATGTGGGGAAGGTCCTCTTCTTTAGTCCCAGCAGATCAGCGTTTTCACGGGAACATTCTCTCTCCTTGCCCTCTGTGTTCCTCCGCCGCCCCGGTTGGCAACCCGTGTGGGACGAAGCTGGCCTCCAGTGAACAGACAGTGTGGCTTCAGGGCATCTGCTCAGTTTTGGGTGCAGTGGGCGTGAAGCCGGGGCTTGTGGGACGAGTGAATTGA

Related Sequences

bmy_05441T0 Protein

Length: 372 aa      View alignments
>bmy_05441T0
MASRRVRTGLRELRPPPLLLLLLLLGPWPAAGHGGKYSREKNEPEPSSXREPGGEFRMEKLNQLWEKAQRLDLPPLKLSELHADLKIQERDEFKWKKLKAEGLDEDGEKEAKLARSLNVILAKYGLDGRKDARAVSSNLISHGPADHSLEDPRLEKLWNKAKTSGKFSSEELDKLWRELQHHKEKVQEYNVLLETLSRTEEIHENVISPVDVSRVKEDALQVGHAELKDKLRDISQGFDRLRRVSHQGYGDQAGFEEPRVLDLWDMAQSANFTEKELEAFRVGTASQPRGLAASLPVDFLIMWGRSSSLVPADQRFHGNILSPCPLCSSAAPVGNPCGTKLASSEQTVWLQGICSVLGAVGVKPGLVGRVN*