Sequence detailsbmy_05449 (Coding sequence)

Part of scaffold_193 (SequenceType object (1))

For more information consult the page for scaffold_193 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HTTENSTTRG00000014476 (Bottlenosed dolphin)

Gene Details

huntingtin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013725, Bottlenosed dolphin)

Protein Percentage 92.73%
cDNA percentage 93.37%
Ka/Ks Ratio 0.3656 (Ka = 0.0333, Ks = 0.091)

HTTENSBTAG00000001506 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001972, Cow)

Protein Percentage 91.06%
cDNA percentage 88.06%
Ka/Ks Ratio 0.10996 (Ka = 0.0479, Ks = 0.4359)

HTT (Minke Whale)

Gene Details

huntingtin

External Links

Gene match (Identifier: BACU004138, Minke Whale)

Protein Percentage 96.93%
cDNA percentage 97.28%
Ka/Ks Ratio 0.38307 (Ka = 0.0197, Ks = 0.0514)

Genome Location

Sequence SequenceType object (2)

Length: 5340 bp    Location:518219..425122   Strand:-
Raw sequence 
>bmy_05449
ATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTCCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGCCGCCGCCGCCGCCGCCGCCGCCGCCCGGACCGGCCGTGGCCGAGGAGCCGCTGCACCGACCAAAGAAAGAACTCTCAGCCACCAAGAAAGACCGTGTGAATCATTGTCTGACAATATGTGAAAACATAGTGGCACAGTCTCTCAGTGATGACGCAGAGTCAGATGTCAGGATGGTGGCTGACGAGTGCCTCAACAAAGTCATAAAAGCTTTGATGGATTCTAATCTTCCGAGGTTACAGTTAGAACTCTATAAGGAAATTAAAAAGAACGGCGCTCCTCGGAGCCTGCGCGCTGCCCTGTGGAGGTTTGCCGAGCTGGCTCACCTCGTTCGGCCTCAGAAATGCAGGCCTTACTTGGTAAACCTTTTGCCTTGCCTGACGCGCACAAGCAAGAGACCCGAAGAGTCTGTCCAGGAGACCTTGGCTGCAGCTGTCCCTAAGATTATGGCTTCTTTCGGCAATTTTGCAAACGACAATGAAATTAAGGTTCTGTTAAAGGCTTTCATAGCGAATCTGAAGTCCAGCTCTCCTACCGTGCGGCGGACAGCGGCCGGCTCGGCGGTGAGCATCTGCCAGCACTCCAGGAGGACGCAGTACTTTTACAGCTGGCTGCTCAGCGTGCTCTTAGGTTTGCTGGTTCCTGTGGAGGAGGAACACTCCACCCTTCTGATTCTCGGAGTGCTGCTCACATTGAGGTATTTGGTGCCCTTGCTGCAGCAGCAGGTCAAGGACACGAGCCTGAAAGGCAGCTTTGGGGTGACACGGAAAGAGATGGAGGTCTCTCCCTCGACGGAGCAGCTTGTCCAGGTGTACGAATTGACCTTGCATTATACTCAGCACCAAGACCACAATGTTGTGACTGGGGCCCTGGAACTCCTACAGCAGCTCCTCAGAACCCCTCCACCTGAGCTCCTGCGAGCGCTGACCACGGCGGGCGGCATCGGGCAGCTCACTGCCGCTAAGGATGAGCCCGGTTGCCGAAGTCGTAGCGGAAGCATCGTGGAGCTTATAGCTGGAGGGGGTTCTTCATGCAGCCCTGTCCTTTCAAGAAAACAAAAAGGGAAAGTGCTCTTTGGAGAAGCAGCAGCCTTGGAGGATGACTCTGAGTCAAGGTCAGACGGCAGCAGCCCCACCTTTGCAGCCTCAGTCAAGGGTGAGATTGGCGGTGAGCTGGCTGCCTCTTCTGGGGTCTCCACTCCTGGCTCTGCCAGCTCAGCTGCCGACTCTGTGGGTCACGACATCATCACTGAGCAGCCCCGGTCACAGCACACACTTCAGACGGACTCGGTGGATCTGACCGGCTGTGACTTGACGAGTGGTGCCACCGACGGGGACGAGGAGGACATCTTGAGCCACAGCTCCAGCCAGATGAGCGCCGTCCCGTCTGACCCTGCCATGGACCTGAACGATGGGACCCAGGCCTCCTCTCCCATCAGTGACAGCTCCCAGACCACCACCGAGGGGCCCGATTCAGCCGTGACCCCTTCCGACAGTTCTGAAATTGTGTTAGATGGTGCCGACAGCCAGTACCCAGGGATGCAGGCGGGGCAGCCCCAGGACGAGGACGAGGACGCTGCTGCAATTCTTCCTGATGAAGACGCGGAGGCTTTCAGAAACTCTTCCATTGCCCTTCAACAAGCACATTTGTTGAAAAGCATGGGCCACAGCAGGCAGCCCTCTGACAGCAGTGTAGATAAATTTGTCTCRAGAGATGAAGCTGCTGAACCAGGAGATCAAGAAAACAAGCCCTGCCGGATCAAAGGCGACATTGGCCAGTCCAGTGACGAAGATTCTGCTCCTCTTGTCCATTGCGTCCGCCTTCTGTCCGCTTCATTTTTGCTAACTGGGGAAAAAAACGCCTTGGTTCCGGATAGGGACGTGAGGGTCAGCGTGAAGGCACTGGCGCTCAGCTGTGTTGGAGCTGCTGTGGCCCTTCACCCTGAATCTTTCTTCGGCAGACTTTACAGAGCACCGCTTGACACCATGGAATACTCTGAGGAGCAGTACGTGTCAGACATCTTGAACTACATCGACCATGGGGACCCACAGGTCAGAGGAGCCACGGCTATCCTCTGTGGGACCCTTGTGTCCTCCATCCTCAGCAGGTCCCGCTTCCACGTGGGAGACTGGATGGGCACCGTCAGAACTCTGACAGGAAATACATTTTCTCTGGCGGACTGCATTCCCCTGCTGCAGAAAACTTTGAAGGACGAATCTTCTGTTACTTGCAAGTTGGCTTGTACAGCTGTGAGGCTCTGCGTCATGAGTCTCTGCAGCAGCAGCTACAGCGAGTGGGGGCTGCAGCTCCTCACCGACGTGCTGGCCCTGCGGAGCAGCTCCTACTGGCTGGTGAGGACGGAGCTTCTGGAGACTGTGGCAGAGATCGACTTCAGGTTGGTGAGCTTTTTGGAGGCAAAAGCAGAAAACCTACACAGAAGGGCCCATCATTATACAGGGCTTTTAAAACTGCAAGAACGAGTGCTCAATAACATTGTCATCTATTTGCTTGGGGATGAAGACCCCAGGGTGCGCCATGTTGCTGCAGCTTCGTTAATGAGGCTTGTCCCGAAGCTGTTTTATAAGTGCGACCAAGGACAGGCTGACGCAGTTGTGGCCATGGCGAGAGGTCAAAGCAGCGTTCACCTGAAGCCTCTCATGCACGAGGCGCAGCCTCCATCTCACTTCTCCGCCAGCACCATAACCAGAATATATAGAGGCTATAACCTACTACCAAGCATAACAGACGTCACTATGGAAAATAACCTTTCGAGAGTCATTGCAGCAGTTTCTCATGAGCTAATCACATCAACCACGAGGGCGCTCACATTTGGATGCTGTGAAGCTCTGTGTCTTCTTTCAACTGCCTTTCCAGTTTGCATTTGGAGTTTAGGTTGGCATTGTGGAGTGCCCCCACTGAGCGCCTCTGATGAGTCTAGAAAGAGCTGTACTGTGGGCATGGTCACGATGATCCTGACCCTGCTTTCATCAGCCTGGTTCCCACTGGATCTCTCAGCCCATCAAGATGCTTTGATTTTAGCCGGGAACTTGCTTGCAGCCAGTGCCCCCAGATCTCTGAGGAGTTCGTGGGCCTCCGAAGAAGAGGCCAGCCCTGCAGCCACCAAGCAGGAAGAGGTGTGGCCGGCTCTGGGTGACCGGACCCTGGTGCCCATGGTGGAGCAGCTCTTCTCCCACCTGCTGAAGGTGGTCAACATCTGTGCACACGTCCTGGATGATGTGGCTCCTGGACCAGCAATAAAGGCAGCCTTGCCGTCTCTAACAAACCCGCCTTCTCTGAGTCCAATCCGACGGAAGGGAAAAGAGAAGGAACCCGGAGAGCAGGTGTCTGTACCCGTGAGTCCCAAGAAAGGCGGTGAGGCCAGTCCAGCCTCTCGACCGTCTGAAACCTCAGGGCCTGTTGCAGCAACCAAGTCCTCGTCACTGGGGAGTTTCTRTCACCTTCCTTCTTACCTTAAATTGCACGATGTCCTGAAAGCTACACACGCAAACTACAAGGTCACCTTGGATCTTCAGAGCAACACCGAAAAGTTTGGGGCTTTTCTGCGCTCTGCCTTGGATGTTCTCTCTCAGATTCTAGAGTTGGCGACACTGCAGGACATCGGGAAGTGTGTTGAAGAGATCCTGGGGTACCTGAAATCCTGCTTCAGTCGAGAACCAGTGATGGCAACTGTTTGTGTCCAGCAGCTGTTGAAGACTCTCTTTGGGACAAACTTGGCCTCCCAGTTTGATGGCTTATCTTCCAACCCCAGCAAGTCTCAAGGCCGTGCTCAGCGCCTTGGCTCTTCCAGCCTGAGGCCGGGCTTGTACCACTACTGCTTCATGGCTCCGTACACCCACTTCACCCAGGCCTTAGCCGACGCCAGCCTAAGGAACATGGTGCAGGCAGAACAGGACCACGACACCTCAGGGTGGTTTGACGTACTCCAGAAAGTGTCTACCCAATTGAAGACAAACCTCACCAGTGTCGCAAAGAACCGCGCAGACAAGAATGCTATTCATAATCACATTCGTTTATTTGAGCCTCTTGTTATAAAAGCTTTAAAACAGTACACGACAACAACCTCTGTGCAGTTACAGAAGCAGGTTTTGGATTTGCTGGCACAGCTGGTTCAGTTACGGGTTAATTACTGCCTTCTGGATTCGGATCAGGTGTTTATTGGATTTGTGCTGAAGCAGTTTGAATACATTGAAGTAGGCCAGTTCAGGGAATCAGAGGCAATTATTCCGAACATCTTTTTCTTCCTGGTATTACTGTCTTATGAACGCTATCATTCAAAACAGATCATTGGAATTCCTAAAATCATCCAGCTCTGTGACGGCATCATGGCCAGTGGGAGGAAGGCTGTGACACACGCCATACCAGCCCTGCAGCCTGTAGTCCACGACCTCTTCGTTTTAAGAGGAACCAACAAAGCTGATGCAGGAAAAGAGCTTGAAACCCAGAAAGAGGTGGTGGTGTCAATGTTACTGAGACTCATCCAGTACCATCAGGTGTTGGAGATGTTCATCCTGGTCCTGCAGCAGTGCCACAAGGAGAGCGAGGACAAGTGGAAGCGGCTGTCTCGGCAGATAGCCGACATCGTCCTCCCGATGTTGGCCAGGCAACAGATGCACATTGATTCTCACGAAGCCCTTGGAGTGTTAAATACGTTATTTGAGATTTTGGCCCCTTCCTCCCTCCGTCCTGTGGACATGCTTTTACGGAGTATGTTCGTCACCCCAGATACCCTGGCATCTGTGACCACTGTTCAACTATGGATATCCGGAATCCTAGCCATTTTGAGGGTTCTGATTTCCCAGTCAACTGAAGATATTGTTCTTTCTCGTATTCAGGAGCTTTCCTTCTCTCCATATTTACTCTGCTGTCCGATAATTAATAGGTTGAGAGATGGGGACAGTAATTCAGTACTGGAAGACCACAGTGAAGGGAGACAAACAAAGAATTTGCCAGAAGAAACGTTCTCCAGGTTTCTGCTACAACTGGTTGGCATCCTTTTAGAGGACATTGTTACAAAACAGCTAAGAGTGGAAATGAGTGAACAGCAGCATACTTTCTACTGCCAAGAGCTAGGCACGCTGCTCATGTGTCTGATCCACATCTTCAAGTCTGGTAGCGGTTTGCCTCTTGATCTCATTACCAGAAATGCCTCTGCAAAGGCCACCTGTGGGCTTTCCCAGGTCCTCATCTTCCCGGACCCTGCAGCCCAATTCCGTGGACAGACCTCTGCTCGCTGA

Related Sequences

bmy_05449T0 SequenceType object (3)

Length: 1780 aa      View alignments
>bmy_05449T0
MATLEKLMKAFESLKSFQQQQQQQQQQQQPPPPPPPPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSLSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRTSKRPEESVQETLAAAVPKIMASFGNFANDNEIKVLLKAFIANLKSSSPTVRRTAAGSAVSICQHSRRTQYFYSWLLSVLLGLLVPVEEEHSTLLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSTEQLVQVYELTLHYTQHQDHNVVTGALELLQQLLRTPPPELLRALTTAGGIGQLTAAKDEPGCRSRSGSIVELIAGGGSSCSPVLSRKQKGKVLFGEAAALEDDSESRSDGSSPTFAASVKGEIGGELAASSGVSTPGSASSAADSVGHDIITEQPRSQHTLQTDSVDLTGCDLTSGATDGDEEDILSHSSSQMSAVPSDPAMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYPGMQAGQPQDEDEDAAAILPDEDAEAFRNSSIALQQAHLLKSMGHSRQPSDSSVDKFVSRDEAAEPGDQENKPCRIKGDIGQSSDEDSAPLVHCVRLLSASFLLTGEKNALVPDRDVRVSVKALALSCVGAAVALHPESFFGRLYRAPLDTMEYSEEQYVSDILNYIDHGDPQVRGATAILCGTLVSSILSRSRFHVGDWMGTVRTLTGNTFSLADCIPLLQKTLKDESSVTCKLACTAVRLCVMSLCSSSYSEWGLQLLTDVLALRSSSYWLVRTELLETVAEIDFRLVSFLEAKAENLHRRAHHYTGLLKLQERVLNNIVIYLLGDEDPRVRHVAAASLMRLVPKLFYKCDQGQADAVVAMARGQSSVHLKPLMHEAQPPSHFSASTITRIYRGYNLLPSITDVTMENNLSRVIAAVSHELITSTTRALTFGCCEALCLLSTAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMVTMILTLLSSAWFPLDLSAHQDALILAGNLLAASAPRSLRSSWASEEEASPAATKQEEVWPALGDRTLVPMVEQLFSHLLKVVNICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQVSVPVSPKKGGEASPASRPSETSGPVAATKSSSLGSFXHLPSYLKLHDVLKATHANYKVTLDLQSNTEKFGAFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPVMATVCVQQLLKTLFGTNLASQFDGLSSNPSKSQGRAQRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQDHDTSGWFDVLQKVSTQLKTNLTSVAKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQKQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPVVHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKESEDKWKRLSRQIADIVLPMLARQQMHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPDTLASVTTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLLCCPIINRLRDGDSNSVLEDHSEGRQTKNLPEETFSRFLLQLVGILLEDIVTKQLRVEMSEQQHTFYCQELGTLLMCLIHIFKSGSGLPLDLITRNASAKATCGLSQVLIFPDPAAQFRGQTSAR*