Part of scaffold_193 (Scaffold)

For more information consult the page for scaffold_193 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF4 ENSTTRG00000014115 (Bottlenosed dolphin)

Gene Details

ring finger protein 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013388, Bottlenosed dolphin)

Protein Percentage 44.75%
cDNA percentage 48.07%
Ka/Ks Ratio 0.35955 (Ka = 0.3316, Ks = 0.9221)

RNF4 ENSBTAG00000027453 (Cow)

Gene Details

E3 ubiquitin ligase RNF4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000039216, Cow)

Protein Percentage 64.0%
cDNA percentage 71.43%
Ka/Ks Ratio 0.31874 (Ka = 0.2713, Ks = 0.8511)

RNF4  (Minke Whale)

Gene Details

ring finger protein 4

External Links

Gene match (Identifier: BACU004130, Minke Whale)

Protein Percentage 71.82%
cDNA percentage 76.24%
Ka/Ks Ratio 0.57415 (Ka = 0.2573, Ks = 0.4481)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 546 bp    Location:1036630..1026227   Strand:-
>bmy_05458
ATGATTGCTTACTCGACTGGGATGTTCATGTCAGCACCAGTCTTCCTGGTGCTCGTGGCGGTGCTACAGCCTCTCAGCCAGATGAGAGGCCCAAGAGCTTGTATTATTCCTATTTCCATCTGTTTACTCCTAGAGTCAACATTTCTGAAGCCCCGATGCTTTTCCCCACCTCTGTCTCTTGTGCTAGAAAGGAGGCGGCCAAGGAGGAACGCCAGGAGGCTGCGGCAGGAGCACGCCGATAGCTGTGTGCTAAGCAGTGATGACGAGGAGCTGCCCAGGGACAGGGACGTGTATGTGACCACCCACACCCCCAGGAACGCCCGGGAGGAGGCCGCTACCGGACTCAGGCCCTCTGGTACTGTCAGTTGTCCCATCTGCATGGACGGGTACTCGGAGATTGTGCAGAACGGACGTCTCATTGTTTCTACAGAATGTGGCCACGTCTTCTGTAGCCAGTGCCTCCGTGATTCCCTTAAGAATGCTAACACTTGCCCAACTTGCAGGAAAAAGATCAACCACAAACGGTACCACCCCATTTATATATGA

Related Sequences

bmy_05458T0 Protein

Length: 182 aa      View alignments
>bmy_05458T0
MIAYSTGMFMSAPVFLVLVAVLQPLSQMRGPRACIIPISICLLLESTFLKPRCFSPPLSLVLERRRPRRNARRLRQEHADSCVLSSDDEELPRDRDVYVTTHTPRNAREEAATGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI*