Part of scaffold_193 (Scaffold)

For more information consult the page for scaffold_193 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

WHSC1 ENSTTRG00000013701 (Bottlenosed dolphin)

Gene Details

Wolf-Hirschhorn syndrome candidate 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013007, Bottlenosed dolphin)

Protein Percentage 82.44%
cDNA percentage 83.2%
Ka/Ks Ratio 0.32469 (Ka = 0.0549, Ks = 0.1691)

WHSC1 ENSBTAG00000007986 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010497, Cow)

Protein Percentage 85.78%
cDNA percentage 85.41%
Ka/Ks Ratio 0.13649 (Ka = 0.0831, Ks = 0.609)

WHSC1  (Minke Whale)

Gene Details

Wolf-Hirschhorn syndrome candidate 1

External Links

Gene match (Identifier: BACU009131, Minke Whale)

Protein Percentage 93.17%
cDNA percentage 94.17%
Ka/Ks Ratio 0.43638 (Ka = 0.0486, Ks = 0.1113)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5136 bp    Location:1550365..1499898   Strand:-
>bmy_05469
ATGGAATTCAGCATCAAAAAAAGTCCTCTTTCTGTTCCGAAGGTTGTAAAGTGTGTGAAGATGAAGCAGGCACCGGAAATCCTTGGCAACACGAACGGAAAGACTCCGAACTGTGAAGTGAGTCGTGAGTGCTCCGTGTTCCTGAGCAAAGCCCAGCTCTCCGCCGGTCTGCAGGAGGGAGTTGTGCAGAAGTTCAATGGCCACGACGCGCTTCCTTTTATCCCAGCTGAGAGGCTGAAAGACCTCACCTCCCGCGTCTTTAATGGAGACCCCGGTGCTCATGATGCCAAATTGCGTTTGGAGTCTCAGGAAATGAAGGGACTTGGGACACCACCTGACACTACCCCTGTCAAAAATGGCTCTCCAGAGATCAAGCTGAAAATCACCAAAACATACATGAACGGGAAACCTCTGTTTGAATCTTCCATATGTGGCGATGGTGCTGCTGCTGTGTCCCAGTCGGAAGAAAATGGACAAAAACCAGAAAATAAAGTGAGGAGGAGCAGGAAGAGAAGCATAAAATATGACTCCTTACTGGAGCAGGGCCTTGTTGAGGCAGCCCTGGTGTCCAGGATCTCGAGTCCCTCGGATAAAAAGATTCCAGCTAAGAAAGAATCCTGTCCAAATAGCAGAGACAAAGACCAGCTGTTGAAGTACAATGTCGGGGATTTGGTGTGGTCCAAGGTGTCCGGTTACCCCTGGTGGCCATGCATGGTCTCCGACGATCCACTCCTGCACAGCTACACCAAACTGAAAGGTCAGAAAAAGAGTGCACGCCAGTATCACGTACAGTTCTTTGGTGATGCCCCAGAAAGAGCTTGGATATTTGAGAAGAGCCTTGTAGCTTTTGAAGGAGAAGGACAGTTTGAAAAATTATGCCAGGAAAGTGCCAAGCAGGCACCCACGAAAGCTGAGAAAATTAAGCTGTTGAAACCTATTTCAGGGAAATTGAGGGCCCAGTGGGCAATGGGCATCGTTCAGGCAGAAGCAGCTGCAAGCATGTCAGTAGAGGAGAGGAAAGCCAAGTTCACCTTCCTTTACGTGGGGGACCAGCTCCATCTCAACCCCCACGTGGCCAAGGAGTCAGGTGTTGCTGTGGAGTCTCTGGGAGAAATGGTAGGGTCCTCAGGAGTCAGGGAAGAAGCTGCTGACAGCCCCAAGTCCACGAGGGAAGAGGGCGTTCCTGTCAAGAGGAGACGGAGAGCCCAGCTGTCCTGCTTTGCTGAGAACCAAGACAGTGACCCGGGGACAGGAAAGACCACTCCTCAAAAGACGGCAGAGGCCGAGCCCAAGCGAGGAGTGGGGTCTCCTCCAGGGAGGAAGAAGGCCGTGGCCTCCACTCCGAGAAGCAGGAAGGGCGATGCGGCGTCCCAGTTTCTGGTCTTCTGTCAAAAGCACAGGGATGAGGTTGTCGCTGAGCACCCGGACGCCTCCGCCGAGGAGATTGAAGAGCTGCTTGGATCCCAGTGGAATATGCTCAACGAGAAACAGAAAGCACGCTATCACACCAAGTTTGCCCTCGTGGCCCCGTCCCCGTCCGAAGAAGACTCTGGTAACTTAAATGGGAAAAAAAGAAACCACACGAAGAGGACACAGGACCCTATAGAAGATGCTGAAGTTGAGGACGCTCCCAGGAAGAGACTCAGGACCGACAGGCACAGTCTTCGGAAGAGAGAGACGTTCACAGACAAAACATCCCGCACAGGCTCTTGCAAGGCCATCGAGGCAGCCTCCTCGCTCAAGAGCCAGGCAGCCACAAAACATCTGTCTGATGCCTGCAAACCCCTGAAGAAGCGGCACCGGGCCCCCGCAGCGGCGTCTGCGTCGCTCGCCTTTAGCAAAAGCTCTTCTCCTTCTGCATCCTTAACTGAGAATGAGGTCCCTGAGTGTCGAGACGTGAGTCCTGTTTTTAGACTATCTGTGAAGAGATGCTCACCTTGGGCTTTTTCGGAACAGGGTAGTGAGGCAGGGAGTGGGTCAGAAGGTGGCACTTCTGACGCGGTCTCCACTGTGGTCCGTGGTGGGGACGCGGCGTCCCCTGCTCTCTCAGCATCAGATGTCTGCTGCAGGCGGCGTGTCATCGTGCACACTCAGTGGCATTCCTTTCACAATCAGTTATGGAAGATGTGTGATAATCTGTTTTTACTGGAATGGGGAGAGGCTGTTAAGCCTTGTGCCCCTTGCGCACCTTGTGTACCAAAAATCAAGCGGGTCTCGGATGGTCCCGGAGACGAGCCCCCGGAGTCCCCAGACGAGAGTGCGGACGAAACCCAGACCGAAGTGTCCGTCTCGTCTAAAAGGTCTGAGCGAGGAGCGACCGCCAAGAAGGAGCACGTGTGTCAGCTGTGCGAGAAGCCGGGCAGCCTGGTGCTGTGCGAGGGCCCCTGCTGCGGCGCCTTCCACCTGGCCTGCCTGGGCCTCTCCCGGAGGCCGGAGGGGAGGTTCACGTGCAGCGAGTGCACCTCAGGTACGTCCCGCCCCGCCCCGCCCCACCATGCGCTCCGGCTCTCGGCCGAGGCCACCGTCCACCTCCCGTCCCCTGGCCGGACTCTTCAGAACTGGTGCCGTGTCGGGAGGACACCCGGAGCCTCCCCGGGAGCCCCCAGGGCCGGCCGTGGGGCACCTCCGCAGTTGGTTTGCCCGGCGGGGTTGGAGGAGGAGCCGGTGCTCCAGCCACGAGGAGCTGCAACTCAAGTCCTGTTCTGTGCCCCTCTCTCCGCCCCTCCGACCCCATCAGGGATTCACTCGTGTTTCGTGTGTAAGGAGAGCAAGGCCGACGTCAAGCGCTGCGTCGTGTCGCAGTGCGGGAAGTTCTACCACGAGGCCTGCGTGCGCAAGTTCCCGCTGACGGTGTTCGAGAGCCGGGGCTTCCGCTGCCCTCTGCACAGCTGCCTGAGCTGCCATGCTTCCAACCCCTCGAACCCAAGGCCGTCGAAAGGTAAAATGATGCGGTGTGTCCGATGCCCGGTCGCCTACCATGGCGGGGACGCGTGTCTGGCGGCGGGCTGCTCAGTGATCGCGTCCAACAGCGTCATCTGCACGAATCACTTCACGGCCCGGAAGGGCAAGAGGCATCACGCCCATGTCAACGTGAGCTGGTGCTTCGTGTGCTCCAAAGGGGGAAGCCTGCTGTGCTGCGAGTCCTGCCCGGCGGCCTTCCACCCCGACTGCCTGAACATCGAGATGCCCGATGGCAGCTGGTTCTGCAACGACTGCAGGGCCGGGAAGAAGCTGCACTTCCAGGACATCATCTGGGTGAAGCTGGGGAACTACAGATGGTGGCCGGCAGAAGTTTGCCATCCCAAAAATGTTCCCCCAAATATTCAGAAAATGAAGCACGAGATTGGAGAATTCCCTGTGTTTTTCTTTGGGTCTAAAGATTATTACTGGACGCATCAGGCGCGAGTGTTCCCGTACATGGAGGGGGACCGGGGCAGCCGCTACCAGGGGGTCAGAGGGATCGGAAGAGTCTTCAAAAACGCACTGCAAGAAGCCGAAGCTCGTTTCCGTGAAATCAAACTTCAAAGGGAAGCCCGAGAAACGCAGGAGAGCGCGCGCAGGCCCCCGCCCTACAAGCACATCAAGGTGAACAAGCCTTATGGGAAAGTGCAGATCCACACGGCGGACATCTCCGAGATCCCCAAGTGCAACTGCAAGCCCACCGACGAGAACCCCTGTGGCTCCGACTCGGAGTGTCTGAACCGCATGCTGATGTTTGAGTGCCACCCGCAGGTGTGCCCCGCGGGGGAGTTCTGCCAGAACCAGTGCTTCACCAAGCGCCAGTACCCCGAGACCAAGATCATCAAGACAGACGGCAAAGGCTGGGGCCTGGTGGCCAAGAGGGACATCAGGAAGGGAGAGTTTGTGAATGAGTACGTGGGGGAGCTGATCGACGAGGAGGAGTGCATGGCAAGGATCAGGCGCGCACACGAGAACGACATCACCCACTTCTACATGCTCACCATAGACAAGGACCGTATAATCGACGCCGGCCCCAAAGGAAACTACTCCCGGTTCATGAATCACAGCTGCCAGCCCAACTGCGAGACCCTCAAGTGGACGGTGAACGGCGACACTCGCGTGGGCCTGTTTGCCGTGTGTGACATTCCTGCAGGTACGGTGCCCCCGGGGCTCCCCACGGGGCTCCCAGTCGAGCGGGCCGGTGGAGGGGCCCTTGTCCGATGCTGCCTGTGGCCGGACCGCCAGGCTCGGGGAGGGCGGGCGGCTGGCGATTTGGAAGTTGTGTTTTGTTTGGAATGTGCACCTTGCAGCGTGGACTCGAAAGCCGTGCGGGGACAGTACAGGTGCGCTGACAGGCGCAGGGCTCGTAGACCTGATGCAGGCTTCTTGGCAGGGTCGGGAGAAGGGCAGTGTCTCAGTGTGGCTTGTCTCCCTCACCCAGGGACAGAGCTGACCTTCAACTATAACCTCGACTGTCTGGGCAACGAGAAAACAGTCTGTCGGTGCGGGGCCTCCAACTGCAGCGGGTTCCTCGGGGACAGGCCCAAGACCTCGGCATCCCTTTCCTCGGAGGAAAAGGGCAAAAAGACCAAGAAAAAGACCAGGAGGCGTCGAACGAAAGGCGAAGGGAAGAAGCCGTCCGAGGACGAGTGCTTCCGCTGTGGTGATGGCGGGCAGCTGGTGCTGTGCGACCGCAAGTCCTGCACCAAGGCCTACCACCTGCCCTGCCTGGGCCTGGGCAAGCGGCCCTTCGGAACACCAGGACGGGGCAGCCTTCAGCTCCACCCAGGACGGGCGGCCGTACTGCGGCGAGCACGACTTGCGGGCAGAGCCGGCCGAGCAGCCCTGCCCGGAGCCCAAGTCCAAGGGGAGGAGGAAGAAGAGGAGGTGCTGGCGGAGGGTCACAGAGGGCAAATAGCGCCAGGCCGGGGCGGGGTGAGATCGGGCGGCCCCGGGTGGCCGGCCCGCCCTGCGGGCAGAGGGCCGGAGGACGCCGCCCGCAGCCCCCGGGACGCACGCACAGGCCTCTTCGGGAGGGGGCGCCTCCCGTCACTGAGCCATCCCAGCAGCGCCCGCTGCGCCGCACTGACCGTCCGAGCCGCGTGGTTCCAGCCGCGAGGTGCGGACGCCCCAGGACAGACAAGCCTGACTACGCAGCATTACAGCTACACTTGA

Related Sequences

bmy_05469T0 Protein

Length: 1712 aa      View alignments
>bmy_05469T0
MEFSIKKSPLSVPKVVKCVKMKQAPEILGNTNGKTPNCEVSRECSVFLSKAQLSAGLQEGVVQKFNGHDALPFIPAERLKDLTSRVFNGDPGAHDAKLRLESQEMKGLGTPPDTTPVKNGSPEIKLKITKTYMNGKPLFESSICGDGAAAVSQSEENGQKPENKVRRSRKRSIKYDSLLEQGLVEAALVSRISSPSDKKIPAKKESCPNSRDKDQLLKYNVGDLVWSKVSGYPWWPCMVSDDPLLHSYTKLKGQKKSARQYHVQFFGDAPERAWIFEKSLVAFEGEGQFEKLCQESAKQAPTKAEKIKLLKPISGKLRAQWAMGIVQAEAAASMSVEERKAKFTFLYVGDQLHLNPHVAKESGVAVESLGEMVGSSGVREEAADSPKSTREEGVPVKRRRRAQLSCFAENQDSDPGTGKTTPQKTAEAEPKRGVGSPPGRKKAVASTPRSRKGDAASQFLVFCQKHRDEVVAEHPDASAEEIEELLGSQWNMLNEKQKARYHTKFALVAPSPSEEDSGNLNGKKRNHTKRTQDPIEDAEVEDAPRKRLRTDRHSLRKRETFTDKTSRTGSCKAIEAASSLKSQAATKHLSDACKPLKKRHRAPAAASASLAFSKSSSPSASLTENEVPECRDVSPVFRLSVKRCSPWAFSEQGSEAGSGSEGGTSDAVSTVVRGGDAASPALSASDVCCRRRVIVHTQWHSFHNQLWKMCDNLFLLEWGEAVKPCAPCAPCVPKIKRVSDGPGDEPPESPDESADETQTEVSVSSKRSERGATAKKEHVCQLCEKPGSLVLCEGPCCGAFHLACLGLSRRPEGRFTCSECTSGTSRPAPPHHALRLSAEATVHLPSPGRTLQNWCRVGRTPGASPGAPRAGRGAPPQLVCPAGLEEEPVLQPRGAATQVLFCAPLSAPPTPSGIHSCFVCKESKADVKRCVVSQCGKFYHEACVRKFPLTVFESRGFRCPLHSCLSCHASNPSNPRPSKGKMMRCVRCPVAYHGGDACLAAGCSVIASNSVICTNHFTARKGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNIEMPDGSWFCNDCRAGKKLHFQDIIWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEIGEFPVFFFGSKDYYWTHQARVFPYMEGDRGSRYQGVRGIGRVFKNALQEAEARFREIKLQREARETQESARRPPPYKHIKVNKPYGKVQIHTADISEIPKCNCKPTDENPCGSDSECLNRMLMFECHPQVCPAGEFCQNQCFTKRQYPETKIIKTDGKGWGLVAKRDIRKGEFVNEYVGELIDEEECMARIRRAHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPNCETLKWTVNGDTRVGLFAVCDIPAGTVPPGLPTGLPVERAGGGALVRCCLWPDRQARGGRAAGDLEVVFCLECAPCSVDSKAVRGQYRCADRRRARRPDAGFLAGSGEGQCLSVACLPHPGTELTFNYNLDCLGNEKTVCRCGASNCSGFLGDRPKTSASLSSEEKGKKTKKKTRRRRTKGEGKKPSEDECFRCGDGGQLVLCDRKSCTKAYHLPCLGLGKRPFGTPGRGSLQLHPGRAAVLRRARLAGRAGRAALPGAQVQGEEEEEEVLAEGHRGQIAPGRGGVRSGGPGWPARPAGRGPEDAARSPRDARTGLFGRGRLPSLSHPSSARCAALTVRAAWFQPRGADAPGQTSLTTQHYSYT*