Sequence details bmy_05479 (Coding sequence)

Part of scaffold_196 (Scaffold)

For more information consult the page for scaffold_196 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTRHD1 ENSTTRG00000015128 (Bottlenosed dolphin)

Gene Details

peptidyl-tRNA hydrolase domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014343, Bottlenosed dolphin)

Protein Percentage 87.05%
cDNA percentage 89.93%
Ka/Ks Ratio 0.776 (Ka = 0.0252, Ks = 0.0325)

Additional orthologs identified in other species via the OPTIC pipeline.

PTRHD1 (Cow)   PTRHD1 (Human)   (Mouse)  

Genome Location

Sequence Coding sequence

Length: 423 bp    Location:328142..331520   Strand:+
Raw sequence 
>bmy_05479
ATGCATCGGGGGATAAGCCTGGCCTTTCAGTTGTGCGGGAAGATGGCGGTCGCTGGCGCAGAGCCGCAGATCCTGGTACAGTACCTGGTGTTACGAAAGGATCTATCACAGGCGCCGTTTTCCTGGCCAGCGGGCGCACTGGTAGCACAGGCTTGTCACGCAGCCACCGCGGCCTTGCACATTCACCAGGACCACCCGCACACGGCCGCTTACCTCCGGGAGCTGGGGCGCATGCGCAAGGTGGTCCTCGAGGCCCCAGATGAGACCACCTTAAAGTTGCTGGCAGAGACGCTGCAGCAGAAGAACATTGACCACAAGCTGTGGGTGGAGCAGCCAGAGAACATCCCCACTTGCATTGCACTCCGTCCCTACCCCAAGGAGGAAGTGAACCAGTATTTGAAGAAGTTCCGATTGTACAAATGA

Related Sequences

bmy_05479T0 Protein

Length: 141 aa      
>bmy_05479T0
MHRGISLAFQLCGKMAVAGAEPQILVQYLVLRKDLSQAPFSWPAGALVAQACHAATAALHIHQDHPHTAAYLRELGRMRKVVLEAPDETTLKLLAETLQQKNIDHKLWVEQPENIPTCIALRPYPKEEVNQYLKKFRLYK*