Sequence details bmy_05482 (Coding sequence)

Part of scaffold_196 (Scaffold)

For more information consult the page for scaffold_196 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITSN2 ENSTTRG00000013435 (Bottlenosed dolphin)

Gene Details

intersectin 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012747, Bottlenosed dolphin)

Protein Percentage 86.53%
cDNA percentage 86.85%
Ka/Ks Ratio 0.26699 (Ka = 0.0117, Ks = 0.0437)

ITSN2 ENSBTAG00000023172 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029334, Cow)

Protein Percentage 92.56%
cDNA percentage 92.43%
Ka/Ks Ratio 0.2064 (Ka = 0.0443, Ks = 0.2147)

ITSN2  (Minke Whale)

Gene Details

intersectin 2

External Links

Gene match (Identifier: BACU010226, Minke Whale)

Protein Percentage 95.36%
cDNA percentage 96.58%
Ka/Ks Ratio 0.53827 (Ka = 0.0304, Ks = 0.0565)

Additional orthologs identified in other species via the OPTIC pipeline.

ITSN2 (Human)   Itsn2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3156 bp    Location:731854..809852   Strand:+
Raw sequence 
>bmy_05482
ATGATGGCTCAGTTTCCCACAGCTGTGAATGGAGGGCCAAACATGTGGGCTATTACCTCTGAAGAACGGACTAAGCATGACAAGCAGTTTGATAACCTCAAACCCTCAGGAGGTTACATAACAGGTGATCAAGCACGTACCTTTTTCTTACAGTCAGGCCTGCCGGCTCCTGTGTTAGCTGAAATATGGGCTTTATCAGACCTGAACAAGGATGGGAAGATGGATCAACAAGAGTTCTCCATAGCTATGAAACTCATCAAACTAAAGCTTCAAGGCCAACAGTTGCCCGTGGTTCTTCCCCCTATTATGAAACAACCTCCTATGTTCTCTCCATTAATTTCTGCTCGTTTTGGAATGGGAAGCATGCCCAATCTGTCCCTTCCTCAGTCACTGCCTCCGGTCGCACCCATAGCAACTCCCTTGTCCTCTGCGGCTTCAGGGACCACCCGTCCTCCCCTAATGATGCCTGCTCCCCTAGTGCCTTCTGTTAGCACTTCATCATTACCAAATGGAACCGCCAGTCTCATTCAGCCTTTATCCATTCCTTATTCTTCTTCAACATTGCCTCATACGTCGTCTTACAGTCTGTTGATGGGAGGATTTGGTGGTGCTAGTATACAGAAAGCCCAGTCTCTGATTGATTTAGGATCCAGTAGCTCAACTTCCTCAACTGCTTCCCTCTCAGGGAACTCACCCAAGACTGGGACCTCAGAGTGGGCAGTTCCGCAGCCTTCAAGATTAAAATATCGGCAAAAATTTAATAGTCTTGACAAAAGCATGAGTGGATACCTCTCAGGTTTTCAAGCTAGAAATGCCCTTCTTCAGTCAAACCTTTCTCAAACTCAGCTAGCTACTATTTGGACTCTGGCTGACATTGATGGTGATGGGCAGCTAAAAGCTGAGGAGTTCATCCTTGCAATGCACCTCACTGATATGGCCAAAGCTGGACAGCCATTGCCACTGACTTTACCTCCGGAGCTTGTCCCTCCGTCTTTTAGAGGAGGAAAGCAAATTGATTCCATTAACGGAACTCTGCCTTCATATCAGAAAATACAAGAAGAGGAACCTCAGAAAAAATTACCAGTTACGTTCGAGGACAAGCGGAAAGCCAACTATGAGCGGGGGAACATGGAGCTGGAGAAGCGACGCCAGGCCGTGATGGAGCAGCAGCAGAGGGAGGCAGAGCGCAAAGCCCAGAAGGAGAAGGAGGAGTGGGAGCGGAAGCAGAGGGAGCTCCAAGAGCAGGAATGGAAGAAACAACTGGAATTCGAAAAGCGCTTGGAGAAGCAGAGGGAACTGGAGAGACAGCGGGAGGAAGAAAGGAGAAAAGAGATAGAAAGACGAGAGGCAGCAAAACAGGAACTTGAAAGACAACGTCGTTTAGAATGGGAGAGAATTCGTAGACAGGAGCTTCTCAATCGAAGGAATAGAGAACAGGAAGAAATTGTCAGGTTAAACTCTAAAAAGAAAAGCCTTCATCTCGAGTTGGAAGCACTGAATGGCAAACATCAGCAGATCTCAGGCAGACTTCAAGACGTCCGACTCAGGAAGCAAACTCAAAAGACTGAGCTGGAAGTTCTGGATAAGCAGTGTGACCTGGAAATTATGGAAATCAGGCAGCTTCAACAGGAACTTCAGGAATATCAAAATAAGCTTATCTATTTGGTGCCAGAGAAGCAATTATTAAATGAAAGAATTAAAAATATGCAGCTCAGTAACACACCTGATTTAGGAGTCGGTTTACTTCATAAAAAATCATTAGAAAAGGAAGAATTATGCCAAAGACTTAAAGAACAATTAGATGCTCTTGAAAAAGAAACTGCATCTAAGCTATCAGAAATGGATTCGTTTAACAATCAACTAAAGTGTGGGAATATGGATGACTCTCTTCTTCAGTGCCTTTTGTCTCTGCTAAGCTGTCTCAACAACCTCTTCCTCTTACTTAAGGAACTGAGAGAAAGCTACAAAACACAGCAGTTAGCCCTTGAACAACTTTATAAGATCAAACGGGACAAACTGAGGGAAATTGAAAGAAAAAGATCAGAGCTAATACAGAAAAAGAAACTAGAAGACGAGGCTACAAGGAAAGCAAAACAAGGAAAAGAAAACTTATGGAAAGAAAATCTTAGAAAGGAGGAAGAAGAAAAACAAAAGCGACTCCAAGAAGAAAAAACACAAGAAAAAGTTCAAGAAGTGGAGTGGAAAGCTGAGGAGAAACAAAGTGAGCCAGCCCGTGCTTTGGTAAATTACAGAGCATTATATTGCTTTGAAGCAAGGAACCATGACGAAATGAGTTTTAATTCTGGGGATATAATACAGGTTGATGAAAAAACCGTAGGAGAACCTGGTTGGCTTTATGGTAGTTTTCAAGGAAATTTTGGCTGGTTTCCATGCAACTATGTAGAAAAAATAACGTCTGAAAAATCTGTGTCGCCTAAGAAGGCCTTACTTCCTCCTACAGTGTCTTTATCTGCTACCTCAACTTCTGAATCACTTTCTTCAAATCAACCAGCATCAGTGACTGATTATCAAAACGTATCATTTTCAAGCCTAACTGTTAACACATCATGGCAGAAAAAATCAGCTTTTACTCGCACTGTGTCCCCTGTATCTACATCACCTATTCACGGACAGGGACAGGTTGTAGAAAATCTAAAAGCACAGGCCCTTTGTTCCTGGACTGCAAAGAAAGATAACCACTTGAACTTCTCAAAACATGACATCATTACTGTCTTGGAGCAGCAAGAAAATTGGTGGTTTGGGGAGGTGCATGGAGGAAGAGGATGGTTTCCAAAATCTTACGTCAAAATCATCCCTGGGAGTGAAGTCAGGCGGGAAGAACCAGAAGCTTTGTATGCAGCTGTAAACAAGAAACCTACCTCTGCAGCCTGTACATATATTGCACTTTATCCGTATTCAAGTGTAGAACCTGGAGATTTGACTTTCACTGAAGGTGAAGAAATATTGGTGACCCAGAAAGATGGAGAATGGTGGACAGGAAGTATCGGAGATAGAACTGGAATTTTTCCATCAAATTACGTCAAACCAAAAGATCACGAGTGTCCAGTGAACGTTTATTATTACTATTATTATCATTACTGTTACCACTACTTCTCCTCTTTTAGGAATACAGGGAGAGAGGAAGTGTGCATGTAG

Related Sequences

bmy_05482T0 Protein

Length: 1052 aa      View alignments
>bmy_05482T0
MMAQFPTAVNGGPNMWAITSEERTKHDKQFDNLKPSGGYITGDQARTFFLQSGLPAPVLAEIWALSDLNKDGKMDQQEFSIAMKLIKLKLQGQQLPVVLPPIMKQPPMFSPLISARFGMGSMPNLSLPQSLPPVAPIATPLSSAASGTTRPPLMMPAPLVPSVSTSSLPNGTASLIQPLSIPYSSSTLPHTSSYSLLMGGFGGASIQKAQSLIDLGSSSSTSSTASLSGNSPKTGTSEWAVPQPSRLKYRQKFNSLDKSMSGYLSGFQARNALLQSNLSQTQLATIWTLADIDGDGQLKAEEFILAMHLTDMAKAGQPLPLTLPPELVPPSFRGGKQIDSINGTLPSYQKIQEEEPQKKLPVTFEDKRKANYERGNMELEKRRQAVMEQQQREAERKAQKEKEEWERKQRELQEQEWKKQLEFEKRLEKQRELERQREEERRKEIERREAAKQELERQRRLEWERIRRQELLNRRNREQEEIVRLNSKKKSLHLELEALNGKHQQISGRLQDVRLRKQTQKTELEVLDKQCDLEIMEIRQLQQELQEYQNKLIYLVPEKQLLNERIKNMQLSNTPDLGVGLLHKKSLEKEELCQRLKEQLDALEKETASKLSEMDSFNNQLKCGNMDDSLLQCLLSLLSCLNNLFLLLKELRESYKTQQLALEQLYKIKRDKLREIERKRSELIQKKKLEDEATRKAKQGKENLWKENLRKEEEEKQKRLQEEKTQEKVQEVEWKAEEKQSEPARALVNYRALYCFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKITSEKSVSPKKALLPPTVSLSATSTSESLSSNQPASVTDYQNVSFSSLTVNTSWQKKSAFTRTVSPVSTSPIHGQGQVVENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQENWWFGEVHGGRGWFPKSYVKIIPGSEVRREEPEALYAAVNKKPTSAACTYIALYPYSSVEPGDLTFTEGEEILVTQKDGEWWTGSIGDRTGIFPSNYVKPKDHECPVNVYYYYYYHYCYHYFSSFRNTGREEVCM*