Sequence details bmy_05487 (Coding sequence)

Part of scaffold_196 (Scaffold)

For more information consult the page for scaffold_196 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000013430 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012742, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.13%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0424)

SF3B14 ENSBTAG00000003407 (Cow)

Gene Details

pre-mRNA branch site protein p14

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004418, Cow)

Protein Percentage 100.0%
cDNA percentage 96.53%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1442)

Additional orthologs identified in other species via the OPTIC pipeline.

SF3B14 (Human)   0610009D07Rik (Mouse)  

Genome Location

Sequence Coding sequence

Length: 396 bp    Location:963207..971343   Strand:+
Raw sequence 
>bmy_05487
ATGGCGATGCAAGCGGCCAAGAGAGCGAACATTCGACTTCCACCTGAAGTAAATCGAATTTTGTATATAAGAAATTTGCCCTACAAAATCACGGCTGAAGAAATGTATGATATATTTGGGAAATATGGACCTATTCGTCAAATCAGAGTTCCGATTCAACTTGGTAGGGGGAACACACCTGAAACTAGAGGAACAGCTTATGTGGTCTATGAAGACATCTTTGATGCCAAGAACGCGTGTGATCACCTGTCAGGATTCAATGTTTGCAACAGATACCTCGTGGTTTTGTACTATAATGCCAACAGGGCATTTCAGAAGATGGACACAAAGAAGAAGGAAGAACAGTTGAAGCTTCTCAAGGAGAAATATGGCATCAACACAGATCCACCAAAGTAA

Related Sequences

bmy_05487T0 Protein

Length: 132 aa      View alignments
>bmy_05487T0
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVPIQLGRGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGINTDPPK*