Sequence detailsbmy_05505 (Coding sequence)

Part of scaffold_195 (SequenceType object (1))

For more information consult the page for scaffold_195 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MPDZENSTTRG00000002969 (Bottlenosed dolphin)

Gene Details

multiple PDZ domain protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002798, Bottlenosed dolphin)

Protein Percentage 86.87%
cDNA percentage 87.16%
Ka/Ks Ratio 0.30243 (Ka = 0.0088, Ks = 0.0293)

MPDZENSBTAG00000043961 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053177, Cow)

Protein Percentage 94.33%
cDNA percentage 93.52%
Ka/Ks Ratio 0.16048 (Ka = 0.03, Ks = 0.1869)

MPDZ (Minke Whale)

Gene Details

multiple PDZ domain protein

External Links

Gene match (Identifier: BACU006583, Minke Whale)

Protein Percentage 98.79%
cDNA percentage 98.89%
Ka/Ks Ratio 0.19686 (Ka = 0.0055, Ks = 0.0281)

Additional orthologs identified in other species via the OPTIC pipeline.

MPDZ (Human)   Mpdz (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3243 bp    Location:580746..685850   Strand:+
Raw sequence 
>bmy_05505
GTAAACATTGCAACTCCCACAATTTCAAATGTTGAATGTGCCCACATTCCACATCTCAGCCCAGCTGTAATTCCGACTCTGCAAAATGAATCATTTTTATTATCCCCAAACAATGGGAATCTGGAAGTTCTTACAGGATTGGGTACTACACACATCAATGGGAAACCTGCTTGTGATGAATTTGATCAACTGATCAAAAATATGGCCCAGGGTCGCCAAATAGAAGTTTTTGAGCTCCTCAAACCTCCATGTGGAGGCCTTGGGTTCAGTGTTGTGGGACTGAGGAGTGAAAACCGGGGAGAACTGGGGATATTTGTGCAGGAGATCCAGGAGGGCAGTGTGGCCCACAGAGATGGAAGATTGAAGGAAACTGATCAGATCCTTGCTATTAACGGACAGGCACTTGATCAGACAATTACACATCAGCAGGCCATCAGCATCCTGCAGAAAGCCAAAGATACTGTCAAGCTGGTTATTGCCAGAGGCTCATTGCCTCAGCTCATCAGCCCCATAGTTTCCCGTTCTCCATCTGCGGCCAGCACAATTTCAGCTCACTCTAATCCGGTTCACTGGCAGCACGTGGAGACTATTGAATTGGTAAATGATGGCTCTGGTCTGGGATTTGGCATTGTAGGAGGAAAAGCAACTGGCGTGATCGTGAAAACCATCCTGCCTGGAGGAGTAGCTGATCAGCATGGGCGATTATGCAGTGGAGACCACATTCTAAAGATTGGTGACACAGATCTAGCAGGAATGAGCAGTGAGCAAGTAGCCCAGGTCCTCAGACAGTGTGGAAATAGAGTCAAATTGATGATTGCAAGAGGTGCCATGGAAGAACCAACGGTGCCCACCTCTTTGGGCATCACGCTTTCCTCATCCCCATCTTCTACACCAGAGATGCGGGTTGATGCTTCTACTCAGAAAAGTGAAGAAAATGAGACATTTGATGTAGAACTCACTAAAAATGTCCAAGGATTAGGAATTACCATTGCTGGTTACATTGGAGATAAAAAATTAGAACCTTCAGGAATCTTTGTAAAGAGCATTACAAAGAGCAGTGCTGTTGAACACGATGGAAGAATCCAAATTGGAGACCAAATTATAGCAGTAGATGGCACAAACCTTCAGGGTTTTACCAATCAACAAGCAGTAGAGGTGTTGCGACACACAGGACAGACTGTTCACCTGACATTAATGAGGAGAGGAACAAAGCAGGACGCTGAGCTCGCGTCACGGGAGGACATCACAAAAGATGCAGTTTTGTCTCCTGTTAATGCAAGCGTAAGCAAAGAAAATTATGAAGAAGATGAAGATTCTTTATCTTTGAGGAGAAACACCAGCATATTACCAATTGAAGAAGAAGGTAAACACCTGGAGCCAGGGTATCCATTACTGTCAGCTGAGAGAGAAGATATAGAAGATGCTCAACAACAGGAAGCTGCCCTGCTGACCAAGTGGCAAAGGATTATGGGCATTAATTATGAAATAGTGGTGGCCCATGTGAGCAAGTTCAGTGAGAACAGCGGGTTGGGGATAAGTCTGGAAGCAACAGTGGGCCATCATTTTATCCGATCTGTTCTACCGGAAGGTCCTGTAGGACACAGTGGGAAGCTTTTCAGTGGAGATGAGCTATTGGAAGTGAACGGCATAACTCTACTTGGGGAGAATCACCAGGATGTGGTGACTATTTTAAAAGAACTGCCTATAGAGGTGACAATGGTGTGCTGTCGTCGAACGGTGCCACCCACCAGCCCGTCAGAGTTGGAGAGCCTGGACTTATGTGACATTGAACTAACAGAAAAGCCTCATATAGATCTAGGTGAGTTTATCGGGTCCTCGGAGACAGAGGATCCTGTGCTGGTGATGACTGATGTGGGTCAGAATGCAGAGGAGGTTCAAGGACCTTTGGCCATGTGGGAAGCCGACGTTCAGAACATAGAGCTGGAGAAAGGGAGCAGAGGACTTGGTTTTAGCATTTTAGATTATCAGGATCCAATTGATCCAGCAAGCACTGTGATCGTAATTCGTTCTCTGGTGCCTGGTGGTGTTGCTGAAAAGGATGGACGACTTCTCCCTGGAGATCGACTCATGTTTGTCAATGATGTTAACTTGGAAAACAGCAGTCTCGAAGAAGCTGTCCAGGCACTGAAGGGTGCACCATCAGGAACTGTGAGAATAGGAGTTGCCAAACCTTTACCCCTTTCACCAGAAGAGGGTTATGTTTCTGCTAAGGAGGATTCCTTTCTCTACCCACCACATTCCTGCGAGGAGGAAGGGCTGGCTGACAAAGCCCTCTTCAGGGCTGACTTGGCTCTGGTGGACACAAATGATGCTGACTTAGCAGATGAATCTGCATTTGAGTCTCAGTACTCTCCTGATAATGACAGTATCTACTCCACTCAAGCCTCTATTTTATCTCTTCACGGCAGTGCTTGTAGTGATAATCTGAATTTTGGTCCCTCCCTTCCATCTTCTCCTCCCAAGGATGTTACTGAAAATTCCTCAGATCCAGTACTTGACTTGCATATGTCCTTGGAGGAGCTATATGCCCAGAACCTCCTGCAAAGACGGGACGAGAGTCCGCCTTCAGTGGACTTGAGCATGGGGACTGCTTCTGGCTTTACCATAAATGATTATACACCTGCCAATGCTATTGAACAGCAATACGAATGTGACAACACAAGAGTGTGGACTGAACCTCACCGACCAAATGAAGTTATACCAAGTGCAGAACTGAGTTCTCCTGTGCTGACTGATTCAGCTGGAAAGGGCTCCAAGTTCTTAATTCAACAGAGGTCCCTGGCCTCTGCTGCTGAGTGTGTCATGCTCCAAACTATATCCAGAGACTCTTTCGAGAGGACTATTACGATAGCAAAAGGCAATTCTAGCCTGGGAATGACAGTAAGTGCTAATAAAGATGGCTTGGGGATGATTGTTCGAAGCATTATTCATGGAGGTGCCATTAGTCGAGATGGTCGGATTGCTGTTGGGGACTGCATCTTGTCTATTAATGAAGAATCTACTATCAGTTTAACGAATACCCAGGCACGAGCCATGTTGAGAAGACATTCTCTCATTGGGCCAGACATAAAATTCTCTGCAGCACCTGCTGACGATCGAGCCCCCTTTTATGTAATTACTTATGTGCCTGCAGAACATTTAGAAGAGTTCAAAATAAGTTTGGGACAACAATCTGGAGGAATAATGGCACTGGATATTTTTTCTTCCTACACTGGCAGGTAG

Related Sequences

bmy_05505T0 SequenceType object (3)

Length: 1081 aa      View alignments
>bmy_05505T0
VNIATPTISNVECAHIPHLSPAVIPTLQNESFLLSPNNGNLEVLTGLGTTHINGKPACDEFDQLIKNMAQGRQIEVFELLKPPCGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKAKDTVKLVIARGSLPQLISPIVSRSPSAASTISAHSNPVHWQHVETIELVNDGSGLGFGIVGGKATGVIVKTILPGGVADQHGRLCSGDHILKIGDTDLAGMSSEQVAQVLRQCGNRVKLMIARGAMEEPTVPTSLGITLSSSPSSTPEMRVDASTQKSEENETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVHLTLMRRGTKQDAELASREDITKDAVLSPVNASVSKENYEEDEDSLSLRRNTSILPIEEEGKHLEPGYPLLSAEREDIEDAQQQEAALLTKWQRIMGINYEIVVAHVSKFSENSGLGISLEATVGHHFIRSVLPEGPVGHSGKLFSGDELLEVNGITLLGENHQDVVTILKELPIEVTMVCCRRTVPPTSPSELESLDLCDIELTEKPHIDLGEFIGSSETEDPVLVMTDVGQNAEEVQGPLAMWEADVQNIELEKGSRGLGFSILDYQDPIDPASTVIVIRSLVPGGVAEKDGRLLPGDRLMFVNDVNLENSSLEEAVQALKGAPSGTVRIGVAKPLPLSPEEGYVSAKEDSFLYPPHSCEEEGLADKALFRADLALVDTNDADLADESAFESQYSPDNDSIYSTQASILSLHGSACSDNLNFGPSLPSSPPKDVTENSSDPVLDLHMSLEELYAQNLLQRRDESPPSVDLSMGTASGFTINDYTPANAIEQQYECDNTRVWTEPHRPNEVIPSAELSSPVLTDSAGKGSKFLIQQRSLASAAECVMLQTISRDSFERTITIAKGNSSLGMTVSANKDGLGMIVRSIIHGGAISRDGRIAVGDCILSINEESTISLTNTQARAMLRRHSLIGPDIKFSAAPADDRAPFYVITYVPAEHLEEFKISLGQQSGGIMALDIFSSYTGR*