Part of scaffold_198 (Scaffold)

For more information consult the page for scaffold_198 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OLR1 ENSTTRG00000009058 (Bottlenosed dolphin)

Gene Details

oxidized low density lipoprotein (lectin-like) receptor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008575, Bottlenosed dolphin)

Protein Percentage 92.66%
cDNA percentage 95.87%
Ka/Ks Ratio 0.56983 (Ka = 0.0361, Ks = 0.0633)

OLR1 ENSBTAG00000004547 (Cow)

Gene Details

oxidized low-density lipoprotein receptor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005975, Cow)

Protein Percentage 84.33%
cDNA percentage 91.09%
Ka/Ks Ratio 0.6096 (Ka = 0.0822, Ks = 0.1349)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 660 bp    Location:249051..257248   Strand:+
>bmy_05515
ATGACTTTTGATGACCTCAAGAGCAAGAGTATGAAGGATCAACTTGACCAGAAGCCAAATGGAGAGAGAGACAAAGTATCCCAGGTGTCTGATCTCCTAAAGCAACRGCATGCAAACCTTACTCACCAGGAAGATATCCTGGAGGGACAGATTTCAGCCCAGCACCAGACAGAAGAATCTTCCCAGGAGTCACAATGGGAACTCAAAGAAATGATAGAAACCCTTGCCCACAAGCTGGATGAAAAATCCAAGAAACTAATGGAACTTCATCACCAGAACCTGAATCTCCAAGAAACTCTGAAAAAAGCAGCAAACTATTCAGGTCCTTGTCCCCAAGACTGGCTCTGGCATGAAGAAAACTGTTACCAATTTTCCTCTGGCCCATTTAATTGGGAAAAAAGCCGGGAGAACTGCTTGTCTTTGGATGCCCACATGCTGAAGATTAATAGCTCAGATGATCTGAAACCCAACCACTCATGGCTCTGGGAGGATGGTTCTCCTTTGATGCCCCACTTGTTTAGACTCCAGGGAGCTGTTTTCCAGATGTATCCTTCAGGCACCTGTGCATATATACAAAGGGGAACTGTTTTTGCTGAAAACTGCATTTTAACTGCATTCAGTATATGTCAGAAGAAGGCGAACCTATTGAGAGTACAGTGA

Related Sequences

bmy_05515T0 Protein

Length: 220 aa      View alignments
>bmy_05515T0
MTFDDLKSKSMKDQLDQKPNGERDKVSQVSDLLKQXHANLTHQEDILEGQISAQHQTEESSQESQWELKEMIETLAHKLDEKSKKLMELHHQNLNLQETLKKAANYSGPCPQDWLWHEENCYQFSSGPFNWEKSRENCLSLDAHMLKINSSDDLKPNHSWLWEDGSPLMPHLFRLQGAVFQMYPSGTCAYIQRGTVFAENCILTAFSICQKKANLLRVQ*