Part of scaffold_198 (Scaffold)

For more information consult the page for scaffold_198 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLEC1B ENSTTRG00000003938 (Bottlenosed dolphin)

Gene Details

C-type lectin domain family 1, member B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003709, Bottlenosed dolphin)

Protein Percentage 87.98%
cDNA percentage 92.15%
Ka/Ks Ratio 0.74886 (Ka = 0.0532, Ks = 0.071)

CLEC1B ENSBTAG00000030423 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000050331, Cow)

Protein Percentage 79.23%
cDNA percentage 88.73%
Ka/Ks Ratio 0.74494 (Ka = 0.1154, Ks = 0.1549)

CLEC1B  (Minke Whale)

Gene Details

C-type lectin domain family 1, member B

External Links

Gene match (Identifier: BACU018823, Minke Whale)

Protein Percentage 96.63%
cDNA percentage 97.76%
Ka/Ks Ratio 0.38176 (Ka = 0.0163, Ks = 0.0427)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 627 bp    Location:334812..327008   Strand:-
>bmy_05519
ATGCCCACAGTTGACCCTGCTTCCTCCTCCTTGTGGCGTGTGATGGCTTTGATTCTGCTGATCTTGTGCATGGGGATGGTTGTTGGGCTGGTGGCTCTGGGGATTATGTCTGTCACGCAGCAAAACTACCTACAAGCTGAGAATGAACATCTCTCAGGAACTCTGAAACAATTAGCGAGGAAGTTCTGCCAAGATTTACTACAACAATCAGGACAAAAGGAAAGCCATAAATGCAGCCCATGTGACATACACTGGAGATATTATGGAGACAGTTGCTATGGATTCTTCAGGCACAACTTGACATGGAAAGACAGTAAGAAGTACTGTGCTGATGTAAATGCTACTCTTCTGAAGATCACCAGGGAGGACATGTTGCAATACATCAGTAGCAGGACTGGATTAATTCGTTGGGTTGGATTGTCCCGCCAGAAATCCAGTGACGTCTGGATGTGGGAAGACGGCTCAGTTCCTTCCAAACATTTGTTCAAACTTTCTGGAACTGCAACAGAAAATATGAATTGTGCTTATTTTCATAATGGGAAAATTCACCCTACCTTCTGTGAGAACAAACATTATTTAATGTGTGAAAGGAAGGCAGGCATGGCAAAGGTGGACCAACTACTTTAA

Related Sequences

bmy_05519T0 Protein

Length: 209 aa      View alignments
>bmy_05519T0
MPTVDPASSSLWRVMALILLILCMGMVVGLVALGIMSVTQQNYLQAENEHLSGTLKQLARKFCQDLLQQSGQKESHKCSPCDIHWRYYGDSCYGFFRHNLTWKDSKKYCADVNATLLKITREDMLQYISSRTGLIRWVGLSRQKSSDVWMWEDGSVPSKHLFKLSGTATENMNCAYFHNGKIHPTFCENKHYLMCERKAGMAKVDQLL*