Part of scaffold_198 (Scaffold)

For more information consult the page for scaffold_198 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AICDA ENSTTRG00000000703 (Bottlenosed dolphin)

Gene Details

activation-induced cytidine deaminase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000661, Bottlenosed dolphin)

Protein Percentage 99.43%
cDNA percentage 98.48%
Ka/Ks Ratio 0.08633 (Ka = 0.0048, Ks = 0.0559)

BT.56893 ENSBTAG00000018849 (Cow)

Gene Details

activation-induced cytidine deaminase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025096, Cow)

Protein Percentage 97.16%
cDNA percentage 94.13%
Ka/Ks Ratio 0.05848 (Ka = 0.0148, Ks = 0.2527)

AICDA  (Minke Whale)

Gene Details

activation-induced cytidine deaminase

External Links

Gene match (Identifier: BACU017018, Minke Whale)

Protein Percentage 99.43%
cDNA percentage 99.43%
Ka/Ks Ratio 0.13848 (Ka = 0.0024, Ks = 0.0176)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 528 bp    Location:1229742..1233367   Strand:+
>bmy_05541
ATGAAGCGGAGGAAGTTTCTTTACCACTTCAAAAACGTGCGCTGGGCTAAGGGCCGCCATGAAACCTACTTGTGCTACGTGGTGAAGCGGCGGGATAGCGCCACCTCCTTCTCACTGGACTTTGGGCACCTTCGAAACAAGGCGGGATGCCACGTGGAACTGCTCTTCCTCCGCTACATCTCCGACTGGGACCTGGACCCCGGGCGGTGCTACCGTGTCACCTGGTTCACGTCTTGGAGCCCCTGCTACGACTGTGCGCGGCACGTGGCCGACTTCCTGAGAGGGTACCCCAATCTGAGTCTGAGGATCTTCACAGCGCGCCTCTACTTCTGCGACAAGAACCGCAAGGCGGAGCCCGAGGGGCTGCGGCGGCTGCACCGCGCTGGGGTCCAAATCGCCATCATGACCTTCAAAGATTATTTTTATTGCTGGAATACTTTTGTGGAAAATCATGAAAGAACTTTCAAAGCCTGGGAGGGGCTGCATGAAAATTCGGTTCGTCTGTCCAGACAGCTTCGACGCATCCTT

Related Sequences

bmy_05541T0 Protein

Length: 176 aa      View alignments
>bmy_05541T0
MKRRKFLYHFKNVRWAKGRHETYLCYVVKRRDSATSFSLDFGHLRNKAGCHVELLFLRYISDWDLDPGRCYRVTWFTSWSPCYDCARHVADFLRGYPNLSLRIFTARLYFCDKNRKAEPEGLRRLHRAGVQIAIMTFKDYFYCWNTFVENHERTFKAWEGLHENSVRLSRQLRRIL