Sequence detailsbmy_05553 (Coding sequence)

Part of scaffold_198 (SequenceType object (1))

For more information consult the page for scaffold_198 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLEC4A (Minke Whale)

Gene Details

C-type lectin domain family 4, member A

External Links

Gene match (Identifier: BACU003054, Minke Whale)

Protein Percentage 80.56%
cDNA percentage 86.73%
Ka/Ks Ratio 1.24425 (Ka = 0.1571, Ks = 0.1262)

Additional orthologs identified in other species via the OPTIC pipeline.

CLEC4A (Cow)   CLEC4A (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 351 bp    Location:1626464..1656873   Strand:+
Raw sequence 
>bmy_05553
ATGACTTCAGAGGTCACTTATGCTGAAGTGAGGTTTAAAAATGAACCCCAGTCCTTAGGCACCAAATCAGAGCCTCCTGCAGAAAAAGAGACTACAAAAGAAGTCCCTCACACAGTATTGGAATGTATGAAAGAAAATTCGACCACAGAAGAAAATACTTGGGATGAGAGTGAGAAGAGATGCTCAAGAATGAAGGCTCACCTGCTGGTGATCAACACCAAGGATGAGCAGGATATCATCACCCGGAAACTGAAAATAAATTCTGTTTATTACGTGGGGCTGTCAGACCCAGAGGGGAAAAGACATTGGCAATGGGTCGATCAGACACCATACAATGAAAGTGCCACTTTC

Related Sequences

bmy_05553T0 SequenceType object (3)

Length: 117 aa      
>bmy_05553T0
MTSEVTYAEVRFKNEPQSLGTKSEPPAEKETTKEVPHTVLECMKENSTTEENTWDESEKRCSRMKAHLLVINTKDEQDIITRKLKINSVYYVGLSDPEGKRHWQWVDQTPYNESATF