Part of scaffold_199 (Scaffold)

For more information consult the page for scaffold_199 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMPD2 ENSTTRG00000004183 (Bottlenosed dolphin)

Gene Details

sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003938, Bottlenosed dolphin)

Protein Percentage 88.12%
cDNA percentage 89.47%
Ka/Ks Ratio 0.51927 (Ka = 0.0519, Ks = 0.0999)

SMPD2 ENSBTAG00000008145 (Cow)

Gene Details

sphingomyelin phosphodiesterase 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010706, Cow)

Protein Percentage 88.12%
cDNA percentage 88.6%
Ka/Ks Ratio 0.26789 (Ka = 0.0783, Ks = 0.2921)

SMPD2  (Minke Whale)

Gene Details

sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)

External Links

Gene match (Identifier: BACU018858, Minke Whale)

Protein Percentage 99.5%
cDNA percentage 99.09%
Ka/Ks Ratio 0.10848 (Ka = 0.0024, Ks = 0.0225)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1404 bp    Location:846170..849191   Strand:+
>bmy_05569
CGCGGCCTTCCCGGGAGAGCGGGAGCAGGGCGACCACCTGTGCGCGGTGCCCCGCGGGGAAGGCCGCCCGCCCGCCGCTGTCCCCAACGCGGCCCTGCGACTGAGGGGCCCGCACCTGGCCGTTGCTGCCCGAGCGCCCCAGCCGTCACCTCCCCTGCGCTTTTCGTCCTCAGGGGCATTCCSTACCTGAGCAAGCACCGGGCCGACCGCGTGAAGCGCCTGGGAGACTTTCTGAACAGGGAGAGCTTCGACCTAGCTCTCCTGGAGGAGGTGTGGAGCGAGCAGGACTTCCAGTACCTGAGGCAGAAGCTGCTGCCCGCCTACCCAGCAGCGCACTACTTCAGGAGGACTTGGCTTTTCAGCGGCATCATTGGCAGTGGTCTCTGTGTCTTCTCCAAACACCCAATCCAGGAATTCACCCAGCACGTCTTCACCCTCAATGGCTACCCCTACATGATCCACCACGGTGACTGGTTTTGTGGGAAGGCCGTGGGGCTGCTGGTGCTCCATCTGGGTGGACTGGTGCTCAACGCCTACGTGACCCATCTCCACGCCGAGTACAATCGACAGAAGGACATCTACCTAGCACATCGTGTGGCCCAAGCTTGGGAACTGGCCCAGTTCATCCACCACACGTCCAAGAAAGCTGATGTGGTTCTATTGTGTGGGGACCTCAACTTGCACCCAAAGGACCTGGGCTGCCGCCTGCTGAAGGAGTGGACGGGACTGCACGATGCCTTTCTGGAGACTCGGGACTTCAAGGGCCCTGAAGAAGGCTGTACGATGGTACCCGAGAACTGCTACGTCAGCCGGCAGGAGCTAGAGCAATTCCCCTTGGGCATCCGCATCGACTATGTGCTTTATAAGGCGGTGTCTGGGCTATACATCTCCTGTAAGACTCTCAGAACTACTACAGGCCACGAGCCTCACAGCGGCAGCCCCCTCTCTGATCATGAGGCGCTGATGGCTACTCTGTGTGTGAGACACAGCCCCCCCCAGCACAACCCCAGCCCTACCCATGCAGAGAGGTCACCGCTGATCAGTGTGCTAAGGGAGGCCTGGACAGAACTGGACCAGGGCATGGCTCAAGGTCGCTGGTGGGCCACCATCGCTGGCTACGTGATTGGTCTAGGGCTTCTTCTCCTGGCGTTGCTGTGTGCCCTGGCGGCTGGAGGAGAGATCAGGGAAGTTGCTGTACTGCTCTGGACCCCCAGTGTAGGACTGGTGCTGGGGGCGGGTGCATTCTATCTCTTCCACGTGCAGGAGGCCAAGGGCTTGTGTCGGGCCCGAGCCGAGCTCCAGCATGTGCTGGGAAGGGCAAGGGAGGCCCAGGACCTGGGCCCAGAGTCCCAGCCAGCCCTGCTCCTGGGGCAGCAGGAGGGGGACAGAGCAGAGGAACAATAA

Related Sequences

bmy_05569T0 Protein

Length: 468 aa      View alignments
>bmy_05569T0
RGLPGRAGAGRPPVRGAPRGRPPARRCPQRGPATEGPAPGRCCPSAPAVTSPALFVLRGIPYLSKHRADRVKRLGDFLNRESFDLALLEEVWSEQDFQYLRQKLLPAYPAAHYFRRTWLFSGIIGSGLCVFSKHPIQEFTQHVFTLNGYPYMIHHGDWFCGKAVGLLVLHLGGLVLNAYVTHLHAEYNRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNLHPKDLGCRLLKEWTGLHDAFLETRDFKGPEEGCTMVPENCYVSRQELEQFPLGIRIDYVLYKAVSGLYISCKTLRTTTGHEPHSGSPLSDHEALMATLCVRHSPPQHNPSPTHAERSPLISVLREAWTELDQGMAQGRWWATIAGYVIGLGLLLLALLCALAAGGEIREVAVLLWTPSVGLVLGAGAFYLFHVQEAKGLCRARAELQHVLGRAREAQDLGPESQPALLLGQQEGDRAEEQ*