Part of scaffold_209 (Scaffold)

For more information consult the page for scaffold_209 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DHX30 ENSTTRG00000002314 (Bottlenosed dolphin)

Gene Details

DEAH (Asp-Glu-Ala-His) box helicase 30

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002168, Bottlenosed dolphin)

Protein Percentage 93.37%
cDNA percentage 94.06%
Ka/Ks Ratio 0.38715 (Ka = 0.0469, Ks = 0.1213)

BT.24588 ENSBTAG00000015833 (Cow)

Gene Details

putative ATP-dependent RNA helicase DHX30

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000030598, Cow)

Protein Percentage 94.53%
cDNA percentage 92.67%
Ka/Ks Ratio 0.12226 (Ka = 0.0317, Ks = 0.2596)

DHX30  (Minke Whale)

Gene Details

DEAH (Asp-Glu-Ala-His) box helicase 30

External Links

Gene match (Identifier: BACU002430, Minke Whale)

Protein Percentage 96.94%
cDNA percentage 97.38%
Ka/Ks Ratio 0.35616 (Ka = 0.0179, Ks = 0.0503)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2259 bp    Location:309071..290055   Strand:-
>bmy_05608
ATGGCGGCCGCCAGGAGACTCATGGCGCTGGCCGCCGGCGTCTCTCCGCGCCTGCGGCCGCTGGCTCCCTACACCCCCGGGCGACAGGGACGCCCGCGCGGCCTCTCGACAGGCTGCATCCATTCTGACCGCACGAAGGCGGCCGCCGAGGCTGAGGCGGGGGCGGCCCCCGACGGGCCTGGGGAAGGCGACGGAAGCATGGTGAACGCTTCTAGGGACCTATTAAAAGAGTTTCCACAGCCCAAAAATCTTCTCAACAGTGTGATTGGAAGAGCCCTTGGCATCTCACATGCAAAAGACAAATTGGTCTACGTGCACACAAATGGACCAAAGAAAAAGAAAGTCACCCTCCACATAAAGTGGCCCAAGAGCGTGGAGGTAGAAGGCTATGGCAGCAAGAAGATCGACGCTGAGAGGCAGGCTGCAGCTGCGGCCTGCCAGCTGTTCAAGGGCTGGGGTCTGCTGGGTCCCCGGAATGAGCTGTTTGATGCAGCCAAATACCGCGTGCTAGCCGATCGCTTTGGCTCTCCGGCTGACAGCTGGTGGCGCCCAGAACCCACCATGCCACCTACTTCCTGGCGGCAGCTGAATCCTGAGAGCATCCGGCCAGGGGGACCTGGGGGCCTATCCCGCTCCTTGGGCCGGGAGGAAGAGGAGGATGAGGAGGAAGAGCTAGAAGAGGGGACCATTGATGTCACTGAATTTCTGTCTATGACCCAGCAGGACTCCCACACCCCACTCAGGGATTCGAGGGGGGGTTCCTTTGAAATGACAGATGACGACAGTGCTATTAGGGCTCTGACCCAGTTTCCGCTTCCCAAGAACCTTCTGGCCAAGGTGATTCAGATAGCGACATCGTCCTCCACAGCCAAGAACCTCATGCAGTTCCATACTGTGGGCACCAAGACCAAGCTGTCCACCCTCACCCTACTCTGGCCCTGTCCCATGACCTTTGTCGCCAAAGGGCGTCGCAAAGCAGAGGCAGAGAATAAGGCGGCAGCCCTGGCTTGTAAGAAACTGAAGAGCCTGGGCCTGGTGGACCGGAACAACGAGCCGCTCACCCACGCCATGTATAACCTGGCCTCCTTGCGCGAGCTGGGTGAGACCCAGCGCCGGCCGTGTACCATCCAGGTGCCTGAACCCATCCTCCGCAAGATAGAGACTTTCCTGAACCACTACCCCATGGACAGTTCATGGATCTCCCCAGAGCTCCGGCTGCAGAGTGATGACATCTTGCCCTTGGGCAAGGACTCGGGGCCGCTGGGTGACCCTATCACAGGCAAGCCCTACGTGCCCCTGTCAGAAACAGAGGAGCTGCGTCTGAGCCAGAGCCTGCTGGAGCTGTGGCGGCGGCGAGGGCCGGTCTGGCAGGAGGCCCCCCAGCTCCCTGTGGACCCTCATCGGGACACCATCCTCAGTGCCATCGAGCAGCACCCGGTGGTGGTCATCGCCGGGGACACGGGCTGTGGGAAGACCACGCGCATCCCCCAGCTGCTGCTGGAGCGCTACGTGACCGAGGGCCGAGGTGCTCGCTGCAACGTGATCATCACTCAGCCGCGCCGCATCTCGGCTGTGTCCGTGGCACAGCGGGTCAGCCACGAACTGGGCCCCTCCCTGCGCCGGAACGTGGGCTTCCAGGTGCGGTTGGAAAGCAAGCCTCCAGCCCGAGGCGGGGCTCTGCTCTTCTGTACAGTGGGCATCCTGCTACGGAAGCTGCAGAGCAACCCCAGCCTGGAGGGCGTGAGCCACGTCATCGTGGACGAGGTGCACGAGCGGGACGTGAACACGGACTTCCTGCTGATTCTGCTCAAGGGCCTGCAGCGGCTCAACCCGGCCCTGCGGCTGGTGCTCATGAGTGCCACAGGCGATAACGAGCGCTTCTCCCGCTACTTTGGTGGCTGCCCTGTCATCAAGGTGCCTGGCTTCATGTACCCTGTCAAGGAGCACTACCTGGAGGATATCCTGGCCAAGCTGGGCAAGCACCAGTACCCACACCGGCATCGGCACCACGAGTCTGAGGATGAATGCGCTCTCGATTTGGACCTCGTGACTGATCTGGTTCTGCACATTGATGCCCGCGGGGAACCAGGTGGGATCCTCTGCTTCCTGCCTGGGTGGCAGGAGATCAAAGGAGTGCAGCAACGCCTCCAGGAGGCCCTGGGCATGCATGAGAGCAAGTACCTCATCCTGCCAGGTGAGAGCATGTGTGCAAGGACGGTGGCCCCCGACACCAGGCTTGCCCTCTGTCCTGGGGAGTGA

Related Sequences

bmy_05608T0 Protein

Length: 753 aa      View alignments
>bmy_05608T0
MAAARRLMALAAGVSPRLRPLAPYTPGRQGRPRGLSTGCIHSDRTKAAAEAEAGAAPDGPGEGDGSMVNASRDLLKEFPQPKNLLNSVIGRALGISHAKDKLVYVHTNGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGWGLLGPRNELFDAAKYRVLADRFGSPADSWWRPEPTMPPTSWRQLNPESIRPGGPGGLSRSLGREEEEDEEEELEEGTIDVTEFLSMTQQDSHTPLRDSRGGSFEMTDDDSAIRALTQFPLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLSTLTLLWPCPMTFVAKGRRKAEAENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILRKIETFLNHYPMDSSWISPELRLQSDDILPLGKDSGPLGDPITGKPYVPLSETEELRLSQSLLELWRRRGPVWQEAPQLPVDPHRDTILSAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPGESMCARTVAPDTRLALCPGE*