Sequence detailsbmy_05620 (Coding sequence)

Part of scaffold_209 (SequenceType object (1))

For more information consult the page for scaffold_209 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC12ENSTTRG00000015854 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 12

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015022, Bottlenosed dolphin)

Protein Percentage 90.42%
cDNA percentage 90.82%
Ka/Ks Ratio 0.40496 (Ka = 0.0113, Ks = 0.0279)

CCDC12ENSBTAG00000011311 (Cow)

Gene Details

coiled-coil domain-containing protein 12

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000015026, Cow)

Protein Percentage 94.01%
cDNA percentage 93.21%
Ka/Ks Ratio 0.09202 (Ka = 0.0258, Ks = 0.2807)

Additional orthologs identified in other species via the OPTIC pipeline.

CCDC12 (Human)   Ccdc12 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 519 bp    Location:1112190..1160836   Strand:+
Raw sequence 
>bmy_05620
ATGTCTGCGGGCAAGATGGCGGCTACTGCGTCAGGTGTGGGCCGGTTAGAGGAAGAGGCGCTGCGGCGAAAGGAACGGCTGAAGGCCCTACGGGAGAAAACCGGGCGCAAGGACAAGGAAGATGGGGAGCCAAAGACCAAGCAGCTCAGAGAAGGGGAGGAGGAAGGCGAGAAGCACAGGGAACTCAGGCTGCGGAACTATGTCCCAGAGGATGAGGACCTGAAGAGGAGAAGGGTGCCCCAGGCCAAGCCAATCGCAGTGGAAGAGAAGGTGAAGGAGCAGCTGGAGGCCGCCAAGCCAGAGCCCATCATTGAGGAAGTGGACCTGGCCAACCTCGCACCCCGGAAGCCTGATTGGGACCTCAAGAGAGATGTAGCCAAGAAGCTGGAGAAGCTAGAAAAGCGGACCCAGAGGGCCATCGCCGAGCTGATCCGTGAGAGGCTGAAGGGCCAGGAGGACAACCTGGCCTCTGCAGTGGCGGCCACCACCACCGAACAAGAGGCTGGTGACTCCGACTGA

Related Sequences

bmy_05620T0 SequenceType object (3)

Length: 173 aa      View alignments
>bmy_05620T0
MSAGKMAATASGVGRLEEEALRRKERLKALREKTGRKDKEDGEPKTKQLREGEEEGEKHRELRLRNYVPEDEDLKRRRVPQAKPIAVEEKVKEQLEAAKPEPIIEEVDLANLAPRKPDWDLKRDVAKKLEKLEKRTQRAIAELIRERLKGQEDNLASAVAATTTEQEAGDSD*