Part of scaffold_209 (Scaffold)

For more information consult the page for scaffold_209 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RTP3 ENSTTRG00000017297 (Bottlenosed dolphin)

Gene Details

receptor (chemosensory) transporter protein 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016394, Bottlenosed dolphin)

Protein Percentage 72.89%
cDNA percentage 79.11%
Ka/Ks Ratio 0.77219 (Ka = 0.237, Ks = 0.307)

RTP3 ENSBTAG00000018767 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024988, Cow)

Protein Percentage 68.3%
cDNA percentage 75.15%
Ka/Ks Ratio 0.4965 (Ka = 0.2622, Ks = 0.5281)

RTP3  (Minke Whale)

Gene Details

receptor (chemosensory) transporter protein 3

External Links

Gene match (Identifier: BACU020566, Minke Whale)

Protein Percentage 72.69%
cDNA percentage 78.12%
Ka/Ks Ratio 0.7421 (Ka = 0.2491, Ks = 0.3357)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 930 bp    Location:1477935..1468162   Strand:-
>bmy_05633
ATGAAGCCATGCCTTCCGTGTCTTTCGAAATTCCCTGTGGAGCCTAGTGCTGTTCTCGGAACTTGGAGCCAGAATCAACTGACYTTTGTCCTTGGGGCAAAGACGTGGTCCACGAGCCCAGTCCAGGGACATAAAGGGAGAGTGGGTCTGAACCCTTGCTCTCTAAAGTGGGAAACCTCATGTCCTGCTCCAGATCCGTCAGAGCCCAGGAGACACTGTCGCACCCAGCTCACGGGGACAGCGGCAATGCGTCAGGACATGGAGGTGTGGAAGCAGGTGTTCCAGGAATTAATCCAGGAGGTGAAACCATGGCACACATGGAAACTGACACTAGACAAAAGCCTTCTTCCTAACATCCTGAAGCCAGGGTGGACACAATACCAGCAGTGGACCTTCGCCAGGTTCCAGTGCTCCTCATGCTCTCGAAATTGGGCCTCTGCCCAAGTTCAGGTCCTTTTCCACATGCACTGGAGTGAGGGGGAATCCAGGGGCCAGGTGAAGATGAGGGTCTTTGCCCAGAGATGTCAGAAGTGCTCCCAGCCTTCGTTTGAGGTTCCCGAGTTCACAGAAGAGAACATCTCAAGGATCCTGAACAACCTGGTGTTGCGAATTCTGAAGAAATGCTATAGAGAAGGATTTACGTTGGTGGAGATTCCTGTGATCAAGGAAATCTCTCTTGAAGGRCCACATGACAGTGACAATTGCGAGGCATGTCTGCAGGGCTTTTGTGTGCAGAGTGAGTCAGGTCTGGCCATGTGGTCACCAATATCCCCATTACCTCCCACAATAAGCTCACCCATCCTCGGGAACACCATCGAAATACCTTCTCCCACGAGGAGTAGCACCGGAGGGGATGCAGTGAAGAAAAAGAAGATTCCTGAAAACAATGCAATCAACTTCAAAATTTGGTCTTTAAGTGATAATTTTTAA

Related Sequences

bmy_05633T0 Protein

Length: 310 aa      View alignments
>bmy_05633T0
MKPCLPCLSKFPVEPSAVLGTWSQNQLTFVLGAKTWSTSPVQGHKGRVGLNPCSLKWETSCPAPDPSEPRRHCRTQLTGTAAMRQDMEVWKQVFQELIQEVKPWHTWKLTLDKSLLPNILKPGWTQYQQWTFARFQCSSCSRNWASAQVQVLFHMHWSEGESRGQVKMRVFAQRCQKCSQPSFEVPEFTEENISRILNNLVLRILKKCYREGFTLVEIPVIKEISLEGPHDSDNCEACLQGFCVQSESGLAMWSPISPLPPTISSPILGNTIEIPSPTRSSTGGDAVKKKKIPENNAINFKIWSLSDNF*