Sequence detailsbmy_05647 (Coding sequence)

Part of scaffold_202 (SequenceType object (1))

For more information consult the page for scaffold_202 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HESX1ENSTTRG00000009140 (Bottlenosed dolphin)

Gene Details

HESX homeobox 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008653, Bottlenosed dolphin)

Protein Percentage 99.24%
cDNA percentage 98.99%
Ka/Ks Ratio 0.08004 (Ka = 0.0032, Ks = 0.0398)

HESX1 (Minke Whale)

Gene Details

HESX homeobox 1

External Links

Gene match (Identifier: BACU015062, Minke Whale)

Protein Percentage 96.33%
cDNA percentage 97.55%
Ka/Ks Ratio 1.43469 (Ka = 0.0267, Ks = 0.0186)

Additional orthologs identified in other species via the OPTIC pipeline.

HESX1 (Cow)   HESX1 (Human)   Hesx1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 558 bp    Location:1420236..1418096   Strand:-
Raw sequence 
>bmy_05647
ATGTCTCCCAGCCTTCAGGAAGGTGCTCGGCTCGGGAAAAGCAAACCCTCGCCCTGCTCCTTTTCAATTGAGAGCATCTTAGGACTGGACCAGAAGAAAGACTGTGTTCCATCAATGAAACCCCACAGGCCCTGGGCAGACACCTGCGGCTCTTCAGGGAAAGAGGTTAACCTATGTCTACATGTCCCGAGTCTTCCTAATGGGATCTCATTACCTTGTACTGTGGATCACTCAGTGCCGGAAGAAAGTGTTTTGAAATATGAAGATTACTTTTCAGCCTCAGAAAGACTTTCTTTGAAAAGAGAGTTGAGTTGGTATAGAGGCCGAAGACCCAGAACCGCTTTTACTCAAAACCAGATTGAAGTGTTGGAAAATGTCTTTAGAGTAAACTGCTATCCTGGCATTGATATCAGAGAAGACTTAGCTCGAAAATTGAACCTAGAGGAAGACAGAATCCAGATCTGGTTCCAAAATCGGCGTGCAAAGCTGAAAAGATCCCATAGAGAATCACAGTTTCTCATGGCAAAAAAAAACTTCAACACAGATCTCCTGGAATAG

Related Sequences

bmy_05647T0 SequenceType object (3)

Length: 186 aa      
>bmy_05647T0
MSPSLQEGARLGKSKPSPCSFSIESILGLDQKKDCVPSMKPHRPWADTCGSSGKEVNLCLHVPSLPNGISLPCTVDHSVPEESVLKYEDYFSASERLSLKRELSWYRGRRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLARKLNLEEDRIQIWFQNRRAKLKRSHRESQFLMAKKNFNTDLLE*