Sequence detailsbmy_05648 (Coding sequence)

Part of scaffold_202 (SequenceType object (1))

For more information consult the page for scaffold_202 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APPL1ENSTTRG00000009144 (Bottlenosed dolphin)

Gene Details

adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008675, Bottlenosed dolphin)

Protein Percentage 88.31%
cDNA percentage 89.29%
Ka/Ks Ratio 0.43007 (Ka = 0.0267, Ks = 0.0622)

APPL1ENSBTAG00000006824 (Cow)

Gene Details

DCC-interacting protein 13-alpha

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000008971, Cow)

Protein Percentage 98.08%
cDNA percentage 97.07%
Ka/Ks Ratio 0.08922 (Ka = 0.0087, Ks = 0.0976)

APPL1 (Minke Whale)

Gene Details

adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1

External Links

Gene match (Identifier: BACU015063, Minke Whale)

Protein Percentage 96.44%
cDNA percentage 97.34%
Ka/Ks Ratio 0.67611 (Ka = 0.0248, Ks = 0.0367)

Additional orthologs identified in other species via the OPTIC pipeline.

APPL1 (Human)   Appl1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1920 bp    Location:1439370..1468433   Strand:+
Raw sequence 
>bmy_05648
ATGCCGGGGATCGACAAGCTGCCCATCGAGGAGACGCTGGAGGACAGCCCGCAGAATGAATTAAGTGCAGCAACACACCTGACTTCAAAACTTTTAAAAGAATATGAAAAACAGCGTTTTCCACTGGGGGGTGATGATGAAGTTATGACTTCTACTTTGCAACAGTTTTCAAAAGTTATAGATGAGCTTAGCTCTTGTCATGCGGTACTTTCAACGCAACTTGCTGATGCCATGATGTTTCCCATTACCCAGTTTAAAGAAAGAGATCTGAAAGAAATATTGACATTAAAGGAAGTGTTTCAGATTGCTAGTAATGATCATGATGCTGCAATTAACAGATACAGCAGATTGTCAAAAAAAAGAGAAAATGACAAGATAAGTTTCTTTAAGATGGGTTCTGAAAATCTCAATGACCAACTGGAAGAATTCTTAACTAATATTGGAACAAGTGTACAGAATGTTCGCAGGGAAATGGACAGTGATGTAGAGACCATGCAGCAGACAATAGAGGATTTGGAAGTAGCCAGTGACCCCTTGTATGTGCCTGACCCAGATCCCACAAAATTTCCTGTTAATCGAAACTTAACCCGAAAGGCTGGATACCTTAATGCTAGGAATAAAACAGGCTTGGTGTCATCTACCTGGGACAGACAGTTTTACTTCACACAGGGTGGAAACCTAATGAGTCAGGCCCGTGGGGACGTAGCAGGAGGCCTGGCCATGGACATAGACAACTGTTCAGTAATGGCTGTGGACTGTGAAGACAGGCGATACTGTTTTCAGATCACTTCTTTTGATGGCAAAAAGTCTTCAATTTTGCAAGCAGAGAGTAAAAAAGACCATGAAGAGTGGATCTGTACAATAAATAACATATCTAAACAGATATATTTAACTGAAAACCCAGAGGAAATTGCTGCACGAGTAAATCAGTCAGCTTTGGAAGCTGTCACTCCTTCCCCGTCTTTCCAGCAGAGGCACGAGAGCCTGCGGCCAGCAGGACAATCTCGGCCACTGACACCTCGAACCAGCAGTTCAGGATCCATAGCATCTGAGTCCACAAATTTGGCTGCCCTCTCTCTAGATTCTCTCGTTGCCCCAGACACCCCAATACAGTTTGACATCATTTCTCCTGTGTGTGAAGATCAGCCTGGCCAGGCAAAAGCCTCTGGCCAGGGAGGCAGGCGTACAAATCCATTTGGAGAATCTGGAGGAGGTACCAAATCTGAAACTGAAGATTCTATTCTTCATCAGTTGTTTATTGTCCGATTCCTTGGTTCTATGGAGGTGAAGTCAGATGACAATCCAGATGTTGTTTATGAAACAATGCGCCAAATCTTAGCTGCCCGGGCCATCCATAACATCTTTCGTATGACAGAATCACATTTATTAGTCTCTTGTGATTGTTTAAAGTTAATTGATCCACAGACACAAGTTACAAGGCTCATGTTTCCATTACCCAGTGTAGTTTTGTATGCTACACACCAGGAAAATAAGAGGCTTTTTGGATTTGTTCTTCGGACATCAGGAGGGAGAAGTGAAAGTAATCTGTCATCAGTCTGCTATATATTTGAATCAAACAATGAGGGTGAAAAGGTACGTGGCTTTTCAAAATGTGTTTCTGTTGTGAAATACATTTGTGATTCTGTTGGACTGGCAAAACAGATAGCTTTGCATGCAGAACTGGATCGCAGGGCATCAGAAAAACAAAAAGAAATAGAGAGAGTAAAAGAGAAGCAACAGAAAGAACTCAGTAAACAAAAACAAATTGAAAAGGACTTAGAAGAACAAAGTCGGTTGATAGCTGCTTCCAGTAGACCAAACCAAGCCAGTAGTGAGGGGCAGTTTGTTGTCCTTAGCAGTAGCCAGTCAGAAGAGAGTGATTTGGGAGAAGAAGGAAAGAAGAGAGAGTCAGAAGCATAA

Related Sequences

bmy_05648T0 SequenceType object (3)

Length: 640 aa      View alignments
>bmy_05648T0
MPGIDKLPIEETLEDSPQNELSAATHLTSKLLKEYEKQRFPLGGDDEVMTSTLQQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKISFFKMGSENLNDQLEEFLTNIGTSVQNVRREMDSDVETMQQTIEDLEVASDPLYVPDPDPTKFPVNRNLTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARGDVAGGLAMDIDNCSVMAVDCEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINNISKQIYLTENPEEIAARVNQSALEAVTPSPSFQQRHESLRPAGQSRPLTPRTSSSGSIASESTNLAALSLDSLVAPDTPIQFDIISPVCEDQPGQAKASGQGGRRTNPFGESGGGTKSETEDSILHQLFIVRFLGSMEVKSDDNPDVVYETMRQILAARAIHNIFRMTESHLLVSCDCLKLIDPQTQVTRLMFPLPSVVLYATHQENKRLFGFVLRTSGGRSESNLSSVCYIFESNNEGEKVRGFSKCVSVVKYICDSVGLAKQIALHAELDRRASEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQASSEGQFVVLSSSQSEESDLGEEGKKRESEA*