Part of scaffold_204 (Scaffold)

For more information consult the page for scaffold_204 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CNOT1 ENSTTRG00000008460 (Bottlenosed dolphin)

Gene Details

CCR4-NOT transcription complex, subunit 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008020, Bottlenosed dolphin)

Protein Percentage 93.18%
cDNA percentage 92.52%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0309)

CNOT1 ENSBTAG00000020782 (Cow)

Gene Details

CCR4-NOT transcription complex subunit 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027695, Cow)

Protein Percentage 99.89%
cDNA percentage 97.52%
Ka/Ks Ratio 0.01116 (Ka = 0.001, Ks = 0.0926)

CNOT1  (Minke Whale)

Gene Details

CCR4-NOT transcription complex, subunit 1

External Links

Gene match (Identifier: BACU018068, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.58%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0147)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5460 bp    Location:1547379..1623780   Strand:+
>bmy_05657
ATGCATGCAATGGCAGAATGGTACATGCGAGGGGAGCAGTATGACCAGGCCAAATTGTCTCGAATACTTGATGTGGCCCAGGACTTGAAGGCCTTGTCAATGCTGCTAAATGGTACTCCATTTGCCTTTGTTATTGACCTTGCTGCACTTGCTTCACGTCGTGAATACCTCAAACTTGACAAGTGGCTCACAGATAAAATTCGAGAGCATGGAGAGCCTTTTATCCAGGCTTGTATGACTTTTTTAAAGAGACGGTGTCCTTCTATTTTGGGTGGACTTGCACCAGAGAAAGATCAGCCCAAAAGTGCTCAACTTCCTCCAGAAACTCTGGCGACAATGTTGGCCTGTTTACAAGCTTGTGCAGGGAGTGTTTCTCAGGAATTATCAGAAACCATCCTCACCATGGTTGCCAACTGCAGTAATGTTATGAACAAGGCTAGACAGCCACCACCTGGAGTTATGCCAAAAGGACGCCCTCCTAGTGCTAGCAGCTTAGATGCCATTTCTCCTGTTCAGATTGACCCTCTTGCTGGAATGGCATCTCTTAGTATAGGTGGTTCAGCTGCCCCTCACACCCAGAGTATGCAGGGCTTTCCTCCAAATTTGGGTTCTGCATTCAGTACCCCACAGTCACCAGCAAAAGCATTTCCACCCCTTTCAACCCCAAATCAGACAACTGCATTCAGTGGTATTGGAGGACTTTCATCACAGCTTCCAGTAGGTGGTCTTGGCACAGGCAGCCTGACTGGTATAGGAACTGGGGCTCTTGGACTCCCTGCAGTGAATAACGATCCTTTTGTGCAGAGGAAACTGGGCACCTCTGGACTGAACCAGCCTACATTCCAGCAGAGTAAGATGAAACCTTCGGACTTGTCTCAGGTGTGGCCAGAGGCAAATCAGCACTTTAGTAAAGAGATAGATGATGAAGCAAACAGCTATTTCCAGAGAATATATAATCACCCACCACATCCAACCATGTCTGTTGATGAGGTATTAGAAATGCTACAGAGGTTTAAAGATTCTACCATAAAGAGAGAACGAGAAGTATTTAACTGTATGCTAAGGAACTTGTTCGAAGAATATCGGTTCTTCCCCCAGTACCCTGATAAAGAGTTACATATAACAGCCTGCCTGTTCGGTGGGATAATCGAAAAAGGACTGGTCACTTACATGGCACTAGGTTTGGCCCTACGATATGTTCTTGAAGCCTTACGCAAGCCTTTTGGATCCAAAATGTATTATTTTGGGATTGCTGCACTAGATAGATTTAAAAATAGATTGAAGGACTATCCCCAGTATTGTCAGCACTTGGCTTCTATTAGTCACTTTATGCAATTTCCACATCATTTACAGGAGTATATCGAGTAYGGACAGCAATCTAGAGATCCTCCTGTGAAAATGCAGGGCTCTATCACAACCCCTGGAAGTATTGCACTGGCTCAAGCCCAGGCCCAGGCCCAGGTTCCAGCGAAAGCTCCCCTTGCTGGTCAGGTTAGCACTATGGTAACCACCTCAACAACCACCACTGTTGCTAAAACAGTTACAGTCACCAGGCCAACTGGAGTCAGCTTTAAGAAAGATGTGCCACCTTCTATTAATACTACAAATATAGATACATTACTTGTGGCCACAGATCAAACAGAGAGAATCGTAGAGCCCCCAGAAAATATCCAAGAGAAAATTGCTTTTATCTTCAACAACCTCTCCCAGTCAAATATGACACAAAAGGTTGAAGAACTAAAGGAAACTGTTAAGGAAGAATTTATGCCTTGGGTTTCACAATACCTGGTTATGAAGAGAGTCAGTATTGAGCCAAACTTTCACAGCCTATATTCAAACTTCCTTGACACACTGAAGAATCCTGAATTTAATAAGATGGTTCTGAATGAGACCTATAGAAACATCAAAGTGCTCCTGACCTCTGATAAAGCTGCAGCCAATTTCTCTGATCGTTCTTTGCTGAAGAATTTGGGACATTGGCTAGGAATGATCACACTAGCTAAAAATAAACCCATCTTACACACTGACTTGGATGTAAAATCTTTGCTGCTAGAAGCTTATGTTAAAGGACAGCAAGAATTGCTCTATGTAGTCCCCTTTGTTGCCAAAGTCTTAGAATCTAGCATTCGTAGTGTGGTTTTTAGGCCACCCAACCCCTGGACAATGGCAATTATGAATGTATTAGCTGAGCTACATCAGGAACATGACTTAAAGTTAAACTTGAAGTTTGAGATTGAGGTCCTCTGCAAGAACCTTGCATTAGACATCAATGAGCTGAAACCTGGAAACCTCCTAAAGGATAAAGATCGCCTAAAGAACTTAGATGAGCAACTCTCTGCTCCAAAGAAAGATGTCAAGCAGCCAGAAGAGCTCCCTCCAATCACAACCACAACAACTTCTACAACACCAGCTACCAGTACCACCTGTACAGCCACGGTTCCACCACAGCCACAGTACAGCTACCATGACATCAATGTCTATTCCCTTGCGGGCCTGGCACCACACATTACTCTAAACCCAACAATTCCCTTGTTTCAGGCCCATCCACAGTTGAAGCAGTGTGTGCGCCAAGCAATTGAAAGGGCCGTCCAGGAGCTGGTCCATCCTGTAGTGGATCGATCAATTAAGATTGCCATGACTACTTGTGAGCAAATAGTCAGGAAAGATTTTGCCCTGGATTCTGAGGAATCTCGAATGCGAATAGCAGCTCATCACATGATGCGAAACTTGACAGCTGGAATGGCTATGATTACTTGCAGGGAACCTTTACTCATGAGCATATCCACCAACCTGAAAAACAGTTTTGCCTCAGCCCTTCGTACTGCATCCCCACAACAAAGGGAAATGATGGATCAGGCAGCTGCTCAGTTAGCTCAGGACAATTGTGAATTAGCTTGCTGTTTTATTCAGAAGACTGCAGTAGAAAAAGCAGGCCCTGAGATGGACAAGAGATTAGCAACTGAATTTGAGCTGAGAAAACATGCTAGGCAAGAAGGGCGCAGGTACTGTGATCCTGTTGTGTTAACATACCAAGCTGAGCGGATGCCAGAGCAAATCAGGCTGAAAGTTGGTGGTGTGGACCCAAAGCAGCTGGCTGTTTATGAAGAGTTTGCACGCAATGTGCCTGGCTTCTTGCCTACAAATGATTTAAGTCAGCCCACAGGATTTTTAGCTCAGCCCATGAAGCAAGCTTGGGCAACAGATGACGTAGCTCAGATTTATGATAAGTGCATTACAGAACTGGAGCAGCACCTTCACGCCATCCCACCAACTTTGGCCATGAACCCCCAAGCTCAGGCTCTTAGAAGTCTTTTGGAGGTTGTAGTATTATCTCGAAACTCTCGGGATGCCATAGCTGCTCTTGGATTGCTCCAGAAGGCTGTAGAGGGCTTACTAGATGCCACCAGTGGTGCTGATGCCGACCTCCTGCTTCGCTACAGAGAGTGCCACCTCTTGGTCTTAAAAGCTCTTCAAGATGGCCGGGCATATGGGTCTCCATGGTGTAACAAACAGATCACAAGGTGCCTAATTGAGTGTCGGGATGAATATAAATACAATGTGGAGGCAGTGGAGTTGCTAATTCGCAATCATTTGGTCAATATGCAACAGTATGATCTTCACCTAGCTCAGTCAATGGAGAATGGTTTAAACTACATGGCTGTGGCATTTGCTATGCAATTGGTAAAAATCCTGCTGGTGGATGAAAGGAGTGTTGCCCATGTTACTGAGGCAGATCTGTTCCACACCATTGAAACCCTCATGAGGATTAATGCTCACTCCAGAGGCAATGCTCCTGAAGGATTGCCCCAGCTGATGGAAGTAGTGCGATCCAACTATGAAGCAATGATTGATCGTGCTCATGGAGGCCCTAACTTTATGATGCATTCTGGGATCTCTCAAGCCTCAGAGTATGATGATCCTCCAGGCCTGAGGGAGAAGGCAGAGTATCTTCTGAGGGAATGGGTGAATCTCTACCATTCAGCAGCAGCTGGTCGTGACAGTACCAAAGCTTTCTCTGCGTTTGTTGGACAGATGCACCAGCAAGGAATCCTGAAGACTGATGACCTCATAACAAGGTTCTTTCGTCTGTGTACTGAAATGTGTGTTGAAATCAGTTACCGTGCTCAGGCAGAACAGCAGCACAATCCTGCTGCTAATCCCACCATGATCCGAGCCAAGTGCTATCACAACCTGGATGCCTTTGTCCGACTCATTGCACTGCTAGTCCTTGGTATAGTAGTGGGAGTTCTCCTACAGGATCATGATGTTCGGCAAAGTGAATTTCAGCAGCTTCCCTACCATCGAATTTTTATCATGCTGCTCTTGGAACTCAATGCACCTGAGCATGTATTGGAAACCATTAATTTCCAGACACTTACAGCTTTCTGCAACACATTCCACATCTTGAGGCCTACCAAAGCTCCTGGCTTTGTGTATGCTTGGCTTGAACTGATCTCCCATCGGATATTTATTGCAAGAATGCTGGCACATACGCCACAGCAGAAGGGATGGCCTATGTATGCACAGCTACTGATTGATTTATTCAAATATTTAGCGCCTTTCCTTAGAAATGTGGAACTCACCAAACCTATGCAAATCCTCTACAAGGGCACTTTAAGAGTGCTGCTGGTTCTTTTGCATGATTTCCCTGAGTTCCTTTGTGATTACCATTATGGATTCTGTGATGTGATCCCACCTAATTGTATCCAGCTAAGAAATCTGATCCTGAGTGCCTTCCCAAGAAACATGAGGCTCCCAGACCCATTCACTCCTAATCTGAAGGTGGATATGTTGAGTGAAATTAACATCGCACCCCGGATTCTCACCAATTTTACTGGAGTGATGCCACCCCAGTTCAAAAAGGATTTGGATTCCTATCTTAAAACTCGATCACCTGTCACTTTTCTTTCTGATCTGCGCAGCAACCTACAGGTATCCAAYGAGCCTGGTAATCGCTACAACCTCCAGCTCATTAATGCACTGGTGCTCTATGTAGGGACTCAGGCCATTGCACACATCCACAACAAGGGCAGCACACCTTCAATGAGCACGATCACCCACTCTGCTCACATGGACATCTTCCAGAACCTGGCTGTGGACTTGGACACTGAAGGTCGGTATCTCTTCTTGAATGCAATTGCAAATCAGCTGCGGTACCCAAATAGCCACACTCACTACTTCAGCTGCACCATGCTCTACCTTTTTGCAGAGGCCAACACTGAAGCTATCCAAGAACAGATCACAAGGGTTCTTTTGGAACGGTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACTTTCATTGAGCTGATTAAAAATCCAGCGTTTAAGTTCTGGAACCACGAGTTTGTACACTGTGCCCCAGAAATTGAAAAGTTATTCCAGTCTGTCGCACAGTGCTGCATGGGACAAAAGCAGGCTCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAG

Related Sequences

bmy_05657T0 Protein

Length: 1820 aa      View alignments
>bmy_05657T0
MHAMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAGSVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASLSIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGGLGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQAQAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLVATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKKDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELEQHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS*