Part of scaffold_206 (Scaffold)

For more information consult the page for scaffold_206 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHMP5 ENSTTRG00000010575 (Bottlenosed dolphin)

Gene Details

charged multivesicular body protein 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010025, Bottlenosed dolphin)

Protein Percentage 98.98%
cDNA percentage 99.32%
Ka/Ks Ratio 0.44149 (Ka = 0.0042, Ks = 0.0096)

BT.48958 ENSBTAG00000012383 (Cow)

Gene Details

charged multivesicular body protein 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016431, Cow)

Protein Percentage 99.54%
cDNA percentage 96.19%
Ka/Ks Ratio 0.01394 (Ka = 0.0021, Ks = 0.1506)

CHMP5  (Minke Whale)

Gene Details

charged multivesicular body protein 5

External Links

Gene match (Identifier: BACU010567, Minke Whale)

Protein Percentage 93.55%
cDNA percentage 97.49%
Ka/Ks Ratio 5.57999 (Ka = 0.0328, Ks = 0.0059)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 660 bp    Location:5574..19334   Strand:+
>bmy_05674
ATGAACCGATTCTTCGGGAAAGCGAAACCCAAGGCTCCGCCGCCCAGCTTGACTGACTGCATTGGCACGGTGGACAGCAGGGCAGAATCTATTGACAAGAAGATTTCTCGGCTGGATGCTGAACTAGTGAAGTATAAGGATCAGATCAAGAAGATGAGAGAGGGTCCTGCAAAGAATATGGTCAAGCAGAAAGCCTTGCGGGTTCTAAAGCAAAAGCGGATGTATGAGCAGCAGCGGGACAATCTTGCCCAACAGTCATTTAACATGGAACAAGCCAATTACACCATCCAGTCATTGAAGGACACCAAGACCACGGTTGATGCTATGAAACTGGGTGTAAAGGAAATGAAGAAAGCATACAAGCAAGTGAAAATCGACCAGATTGAGGATATACAAGACCAGCTAGAGGATATGATGGAAGATGCAAATGAAATCCAAGAAGCACTGAGTCGTAGTTACGGCACCCCAGAATTAGATGAAGATGACCTAGAAGCAGAGTTGGATGCMCTGGGCGATGAGCTTCTGGCTGATGAAGACAGTTCTTATTTGGATGAAGCAGCAGCTGCACCTGCAATTCCAGAAGGTGTTCCCACTGACACAAAGAATAAGGATGGAGTCTTGGTGGATGAATTCGGATTGCCACAGATCCCTGCTTCGTAG

Related Sequences

bmy_05674T0 Protein

Length: 220 aa      View alignments
>bmy_05674T0
MNRFFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAKNMVKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDIQDQLEDMMEDANEIQEALSRSYGTPELDEDDLEAELDALGDELLADEDSSYLDEAAAAPAIPEGVPTDTKNKDGVLVDEFGLPQIPAS*