Part of scaffold_206 (Scaffold)

For more information consult the page for scaffold_206 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NFX1 ENSTTRG00000010576 (Bottlenosed dolphin)

Gene Details

nuclear transcription factor, X-box binding 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010028, Bottlenosed dolphin)

Protein Percentage 77.03%
cDNA percentage 78.46%
Ka/Ks Ratio 0.4056 (Ka = 0.0431, Ks = 0.1063)

NFX1 ENSBTAG00000012385 (Cow)

Gene Details

Transcriptional repressor NF-X1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042616, Cow)

Protein Percentage 92.59%
cDNA percentage 91.6%
Ka/Ks Ratio 0.18094 (Ka = 0.0448, Ks = 0.2477)

NFX1  (Minke Whale)

Gene Details

nuclear transcription factor, X-box binding 1

External Links

Gene match (Identifier: BACU006651, Minke Whale)

Protein Percentage 82.72%
cDNA percentage 85.16%
Ka/Ks Ratio 0.53144 (Ka = 0.1417, Ks = 0.2666)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2199 bp    Location:47181..104786   Strand:+
>bmy_05675
ATGGTGTGCTGTGAATTGGTTCGTGTCACAGCCCCAGTGTGGAGTTGTCAGAGCTGTTACCATGTGTTTCATTTGAACTGCATAAAGAAATGGGCAAGGTCTCCAGCGTCTCAAGCAGATGGCCAGAGTGGTTGGAGGTGCCCTGCATGTCAGAATGTTTCTGCACATGTTCCTAATAACTATACTTGTTTCTGTGGCAAGGTAAAGAATCCTGAATGGAGCAGAAATGAAATTCCACATAGTTGTGGTGAGGTGTGTAGAAAGAAACAGCCTGGCCAGGACTGCCCACATTCCTGTAACCTTCTCTGCCATCCTGGACCTTGCCCACCCTGCCCTGCATTTATGACTAAAACATGTGAATGTGGACGGACCAGGCACACAGTTCGCTGTGGTCAGGCCATCTCAGTCCACTGTTCTAACCCTTGTGGGAATGTTTTGAATTGTGGTCGGCACCACTGTGCTGAGCTGTGCCATGGGGGTCCATGCCAGCCTTGTCGGATCATATTAAACCAAGTATGCTACTGTGGCAGCACCTCCCGAGACRTGTTATGTGGAACAGACATAGGAAAGTCTGATGGATTTGGGGACTTTGGCTGCTTAAAGATATGTGGCAAGGACTTGAAATGTGGGAACCACACGTGTTCACAGGTGTGCCACCCTCAGCCCTGCCAGCCATGCCCACGTCTCCCCCAGCTGGTGCGCTGTTGCCCTTGTGGGCAAACCCCTCTCAGCCAATTGCTAGAACTTGGAAGTAGCGGTCGGAAAACATGCATGGATCCTGTCCCTTCATGTGGAAAAGTGTGCGGCAAGCCTCTGCCTTGTGGTTCCTTAGATTTCATTCATACTTGTGAAAAGCGCTGCCATGAAGGAGACTGTGGACCATGCTCTCGCACATCAGTTATTTCCTGCAGATGCTCTTTCAGAACAAAGCAGATGCTACATTTATGTGTGACAAGAGGTGTAACAAGAAACGGTTTCGATGAATTAACCTGCCACTGTGGCGCGTCAGTGATCTACCCTCCAGTTCCCTGTGGTACCAGGCCCCCTGAGTGTACCCAGACCTGTGCCAGAGTCCATGAATGTGACCATCCAGTGTATCATTCTTGTCATAGTGAGGACAAGTGTCCCCCTTGTACTTTTCTAACTCAGAAATGGTGCATGGGCAAACATGAGTTACGAAGCAACATCCCCTGTCACCTGGTTGATATCTCTTGCGGATTACCCTGCGGTGCCACGCTACCGTGTGGGATGCACAGGTGTCAGAGACTCTGTCACAAAGGAGAGTGTCTTGTGGATGAGGTCTGCAAGCAGCCCTGCACCATCTCCAGAGCTGACTGTGGCCACCCATGTATGGCACCTTGCCACCTCAGCTCACCCTGCCCTGTGACTGCTTGCAAAGCCAAGAAGGGAAGATGTCCTGAAGTTGCGTGCATTGCTTCAGCGTCCCACCGCTTGGGGCACAGCCAGGACCAGGTCCTGCGCTCCGGCTGTGGTCTGGGGGGTTCTGACTGTTCTGTTCTTGTGAAACTGCAGCACCTTTCTTCCCTTTCTTTTTTATACTTCAGAATAGCTGCTATTTCCATGGCCTCCAAAATAACAGACATGCAGCTTGGAGATTCAGTGGAGATCAGCAAGTTAATTACTAAGAAGGAAATTCACCAAGCCAGGCTGGAGTGTGATGAGGAGTGTTCAGCCTTGGAAAGGAGAAAGCGGTTAGCAGAGGCATTTCATATCAGTGATGATTCTGATCCTTTCAACGTACGTTCTTCAGGGTCAAAATTCAGTGACAGTTTGAAAGAAGATGCTAGGAAGGACTTAAAGTTTGTCAGCGACATTGAGAAGGAAATGGAAGCCCTTGTGGAGGCTGTGAATAAGGGAAAGAATAGTAAGAAGAGCCACTGCTTCCCTCCCATGAACAGAGACCACCGCCGGATCATCCACGATCTGGCCCAAGTGTACGGCCTGGAGAGCGTGAGCTATGACAGTGAACCGAAGCGCAACGTCGTGGTCACTGCGGTCAGAGGGAAGTCTATTTGTCCTCCTACCACGCTGACAGGTGTACTTGAAAAGGAGACACAGTCACGGCCTCCTCCACCGATTCCTCATCACAGACATCAGACAGACAAGACTCCTGGGAGCAGTAATTTACAGAAGATAGCCAAGGAGCCAGTAATTGACTACTTTGATGTCCAGGACTGA

Related Sequences

bmy_05675T0 Protein

Length: 733 aa      View alignments
>bmy_05675T0
MVCCELVRVTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQNVSAHVPNNYTCFCGKVKNPEWSRNEIPHSCGEVCRKKQPGQDCPHSCNLLCHPGPCPPCPAFMTKTCECGRTRHTVRCGQAISVHCSNPCGNVLNCGRHHCAELCHGGPCQPCRIILNQVCYCGSTSRDXLCGTDIGKSDGFGDFGCLKICGKDLKCGNHTCSQVCHPQPCQPCPRLPQLVRCCPCGQTPLSQLLELGSSGRKTCMDPVPSCGKVCGKPLPCGSLDFIHTCEKRCHEGDCGPCSRTSVISCRCSFRTKQMLHLCVTRGVTRNGFDELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEDKCPPCTFLTQKWCMGKHELRSNIPCHLVDISCGLPCGATLPCGMHRCQRLCHKGECLVDEVCKQPCTISRADCGHPCMAPCHLSSPCPVTACKAKKGRCPEVACIASASHRLGHSQDQVLRSGCGLGGSDCSVLVKLQHLSSLSFLYFRIAAISMASKITDMQLGDSVEISKLITKKEIHQARLECDEECSALERRKRLAEAFHISDDSDPFNVRSSGSKFSDSLKEDARKDLKFVSDIEKEMEALVEAVNKGKNSKKSHCFPPMNRDHRRIIHDLAQVYGLESVSYDSEPKRNVVVTAVRGKSICPPTTLTGVLEKETQSRPPPPIPHHRHQTDKTPGSSNLQKIAKEPVIDYFDVQD*