Sequence detailsbmy_05683 (Coding sequence)

Part of scaffold_206 (SequenceType object (1))

For more information consult the page for scaffold_206 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UBAP2ENSTTRG00000010588 (Bottlenosed dolphin)

Gene Details

ubiquitin associated protein 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010039, Bottlenosed dolphin)

Protein Percentage 93.93%
cDNA percentage 95.35%
Ka/Ks Ratio 0.5664 (Ka = 0.0397, Ks = 0.0702)

UBAP2ENSBTAG00000000695 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000930, Cow)

Protein Percentage 85.63%
cDNA percentage 88.88%
Ka/Ks Ratio 0.43029 (Ka = 0.0905, Ks = 0.2104)

Additional orthologs identified in other species via the OPTIC pipeline.

UBAP2 (Human)   Ubap2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3657 bp    Location:392081..299232   Strand:-
Raw sequence 
>bmy_05683
ATGAGCAGCTCTTCACCTGGCGACATCATCCGTGACTTGAATTTTCTATTTTGTGCATACATTATTTTGTATATACTGTATAAGATGACTTCGATGAGCAGTGACCGGTCCAGAGGTGCTCGGGAAAAGCCACAGATTTCAGTGACACAGGCAACACAACTACAGAAACAAGTGGTACAGGCAACAGCTGAACAGATGCGTCTCGCTCAAGTGATCTTTGATAAAAATGATTCAGAGTTTGAAGCTAAAGTTAAACAGCTTATGGAAGTGACAGGAAAAAATCAGGATGAATGCATAGTGGCTCTGCACGACTGTAATGGAGATGTCAACAAAGCTATCAATATATTGCTGGAAGGGAATTCAGATACGTTAGAGGTGAAGAGAATGGAATTGATTGCAATCAAGGGGACAAGCCTTCAGACCGTGGCAGGAGAGCTCGTGGTAGAGGGACCAGCAGATTGGGTGCACTGGTTGGGAATGTTGGTGCTGTTAGGAACAATGACAGTAATGTTTGGGACATTTAACCCTGCGGACTATTCAGATTCTCCATCTATAGATGGGTATGGGACAAAACCAGTAGTTTGGGAAGCTGCTCAGAATGGTGCAGATGAGGGAACTGAACTGGCATCAAATGCTCAAAATGTAGCTCAGAATCTGCCAAACAAAAATTCTTTTGGACTCAAAGGGGCCTGGAAGAATTCTGTGGACGAGTGGACAACGGAAGACTGGACTGAAGATCTTTCTGAAACAAAGGTCTTCACTTCCTCATCTGTTCCAGCAGAGCATCATGTCACACCTGGGCAAAGTGTTGATCTGGTAGCCTTGCTCCAGAAGCCTGTTCCTCACAGTCAAGCCTCAGAAGTCAACTCCTTTGAAACTTCCCAACAGCAGGGCTTTGGCCAAGCCCTTGTCTTCACAAATTCTCAGCACAGCAATCAGATGGCACMAGGGACTGGCATCTCCACTGCTGTCAATCCCTACCCGCCTCAGAGTCTGTCATCCGTCCTTGGTTCAGGATTTGGAGAGCTTGCACCTTCCAAAGTGGCAAACATCACCAGCTCCCAGATTTTGGACCAGTTGGAAGCTCCGAGTTTGGGCCAGTTTACCACCACCCCAAGTTCACAGCAGAATAATACAAGTCCTCCCACAACCGCTTCTTCTTGGGACCTCAAGCCCTCAGCATCCCAGTCCTCAGTCCTTAGTCATTTTGACTTCAAATCTCAGCCTGAGCCATCCCCTGTTCTTAGCCAACTGAGCCAACGACAGCAGCAGCAGACTCAGGCAGTCACTGTTCCTCCTCCTGGGTTGGAGTCCTTTCCTTCCCAGGTGAAACTCCGAGAGTCAGCACCCAAAGACAGCAGTACCTCCACTGTGAACAAACTTCTGCAGCTTCCCAGCGTGACTGTCGAAAACATYGCCATGTCTGCTCACCAGCCACAGCCTAAACACATCAAACTCCCTAAGCGGCGAATACCTCCAGCTTCTAAGATCCCAGCTTCTGCAGTGGAAATGCCTGGTTCAGCAGATGTCACAGGATTAAATGTCCAGTTTGGCGCCTTGGAATTTGGATCAGAACCATCTCTCTCTGAATTTGGATCAGCTGCAAGCAGTGAAAATAGTAGCCAGATTCCCATTAGCTTGTATCCGAAATCTTTAAGTGACTCTTTGAATACCTCCCTAGCAGTGACCAGTGCAGTGCAGAACTCCACCCACACAACTTCAGTCATTACCTCCTCCAGTCTGACCAGCTCATCGCTGAGCTCCACTAGTCCTGTAACAACGTCTTCCTCCTATGACCAGAGTTCTGTGCACGACAGGAGCGCATACCAAAGCTCTGTGAGTCCATCGGAGTCAGCTCCAGGAACCATCACGAATGGACATGGTGGTAGTCGAAGTCAGCAGACAGTAGACACTCCTTCATCTGTTCCAGCTCCAAAGACCACAGACCCTCCCTCCGCCCTCCCATCCGTGGGCTCCCTGCCCAGCACCACCTCCTGCACTCCGCTTCTGCCCTCTGCACCCCAGCACACTGCCGCTCTGCCCTCCTTGTCCCAGCCTGGTGACCTGTCCAGCAGCCCCCTCTCTCAGCTTAGCAGCTCCCTCTCCGGCCACCAGAGCAGCCTCTCCTCCGCGCACACGGTGCTCTCCACCAGCACGTCACACACGATCCATGTGTCCTGGCTTTTGTCTTGCCAGCATGCCGGCGTGGAGAGCGCCCCTTCCCTCCAGTCCTCAGCCACCTTCTCAACGGCAGCAACCTGTGCCTCGAGTGCCGCGTCCTCAGGGCTCAGCCTGCCGAGCAGCATGAACACGGTCAGCAGCCTCTGCCTGGGCGGTACCGCTGTGAGTGCCCCCAGCAGCAGTGCCAGGGCCACGCCCTTGGTGACCTCAGGTGTGTGCCCCCCGGGGCCTTTCCGGCTCCCCCGCCCCTCGAAGCATGGCTTCCGTTTCTCTCGGCTGCTGCCCTCCCCTCTTGCCCGTGGCCTCGTCTGGGACGGCGCCGTGACAGCGGGCTCGACACCCGCCGTGCCCACAGTACCTGAGGAACCTCGCCCTTGTGGTGGCCCCTTCACTCCATTTGAGTTTGCCTTCACAGGCAAAGCGCCCCCCAGCCTGCCCCAGGGGGCGCCTCCCCTGCTGCACAGCCAGTACCTCGTGGGCCCCGGAGGACTGCTTCCTGCCTACCCGATTTATGGCTATGACGAGCTCCAGATGCTGCAGTCACGGCTGCCGATGGATTACTATGGGATTCCTTTCGCTACACCCGCAGCCCTCGCCACTCGAGATGGGAGCCTCGCTAATAATCCCTATTCAGGTGATGTCACAAAGTTTGGCCGAGGAGACTCTGCGTCCCCTGCACCTGCCACCACCCTGGCTCAGCCCCAGCAGAGCCAGTCCCAGGCCCACCACACAGCCCAGCAGCCCTTTCTGAACCCTGCCCTGCCGCCTGGCTACAGCTACACTGGCCTCCCCTACTATACAGGCGTACCCAGTGCCTTCCAGTATGGGCCCACCGTGTTTGTCCCTCCGGCCTCAGCCAAGCAGCACGGTGTGAGCCTCAGCAGCCCCAGCACCCCTTTCCAGCAGGCCAGTGGCTATGGCCAGCACAGCTACAGCGCAGGTGAGGGGTGCTCCCGCCACGGAGAGGCACGGGAAGGACAGGCTCACCTAGCTCACACGTGCCTCTTGTCCCCTGCCGTGCTAGGTTACGATGACGTGAGCCAGGGGGCAGCAGCGGGAGACTACACCAAGGGTGGCTATGGTGGATCATCGCAGGCACAGAGCAAGTCTGCAGGTTCTGGGCCTGGCAAAGGAGTGTCGGCGTCTTCGAGCGCCCCCGGCCTCCCTGACGTGACTGGGTCTGTCTACAGCAAGACTCAGACTTTCGACAGGCAGGGATTTCACGCGGGGACCCCGCCGCCGTTCAGCCTGCCCTCGGCCTTGGGCTCCCCTGGGCCCCTGGGCCCCGGTTACGCGCCCTCACCGCTCGTGCACGTCCTGCCCGCCCACCAGCAGCCTCACTCACAGCTGCTGCACCACCACCTCCCACAGGACGCTCAGAGCGGCTCCGGTCAGCGCAGCCAGCCCAGCTCCCTGCAGCCCAAGTCGCAAGCCTCCAAACCTGCCTACGGCAACTCTCCATACTGGACAAACTGA

Related Sequences

bmy_05683T0 SequenceType object (3)

Length: 1219 aa      View alignments
>bmy_05683T0
MSSSSPGDIIRDLNFLFCAYIILYILYKMTSMSSDRSRGAREKPQISVTQATQLQKQVVQATAEQMRLAQVIFDKNDSEFEAKVKQLMEVTGKNQDECIVALHDCNGDVNKAINILLEGNSDTLEVKRMELIAIKGTSLQTVAGELVVEGPADWVHWLGMLVLLGTMTVMFGTFNPADYSDSPSIDGYGTKPVVWEAAQNGADEGTELASNAQNVAQNLPNKNSFGLKGAWKNSVDEWTTEDWTEDLSETKVFTSSSVPAEHHVTPGQSVDLVALLQKPVPHSQASEVNSFETSQQQGFGQALVFTNSQHSNQMAXGTGISTAVNPYPPQSLSSVLGSGFGELAPSKVANITSSQILDQLEAPSLGQFTTTPSSQQNNTSPPTTASSWDLKPSASQSSVLSHFDFKSQPEPSPVLSQLSQRQQQQTQAVTVPPPGLESFPSQVKLRESAPKDSSTSTVNKLLQLPSVTVENIAMSAHQPQPKHIKLPKRRIPPASKIPASAVEMPGSADVTGLNVQFGALEFGSEPSLSEFGSAASSENSSQIPISLYPKSLSDSLNTSLAVTSAVQNSTHTTSVITSSSLTSSSLSSTSPVTTSSSYDQSSVHDRSAYQSSVSPSESAPGTITNGHGGSRSQQTVDTPSSVPAPKTTDPPSALPSVGSLPSTTSCTPLLPSAPQHTAALPSLSQPGDLSSSPLSQLSSSLSGHQSSLSSAHTVLSTSTSHTIHVSWLLSCQHAGVESAPSLQSSATFSTAATCASSAASSGLSLPSSMNTVSSLCLGGTAVSAPSSSARATPLVTSGVCPPGPFRLPRPSKHGFRFSRLLPSPLARGLVWDGAVTAGSTPAVPTVPEEPRPCGGPFTPFEFAFTGKAPPSLPQGAPPLLHSQYLVGPGGLLPAYPIYGYDELQMLQSRLPMDYYGIPFATPAALATRDGSLANNPYSGDVTKFGRGDSASPAPATTLAQPQQSQSQAHHTAQQPFLNPALPPGYSYTGLPYYTGVPSAFQYGPTVFVPPASAKQHGVSLSSPSTPFQQASGYGQHSYSAGEGCSRHGEAREGQAHLAHTCLLSPAVLGYDDVSQGAAAGDYTKGGYGGSSQAQSKSAGSGPGKGVSASSSAPGLPDVTGSVYSKTQTFDRQGFHAGTPPPFSLPSALGSPGPLGPGYAPSPLVHVLPAHQQPHSQLLHHHLPQDAQSGSGQRSQPSSLQPKSQASKPAYGNSPYWTN*