Sequence details bmy_05701 (Coding sequence)

Part of scaffold_206 (Scaffold)

For more information consult the page for scaffold_206 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCL21 ENSTTRG00000005684 (Bottlenosed dolphin)

Gene Details

chemokine (C-C motif) ligand 21

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005367, Bottlenosed dolphin)

Protein Percentage 90.28%
cDNA percentage 96.3%
Ka/Ks Ratio 3.05005 (Ka = 0.048, Ks = 0.0157)

CCL21  (Minke Whale)

Gene Details

chemokine (C-C motif) ligand 21

External Links

Gene match (Identifier: BACU006678, Minke Whale)

Protein Percentage 90.08%
cDNA percentage 91.6%
Ka/Ks Ratio 0.80557 (Ka = 0.0343, Ks = 0.0425)

Additional orthologs identified in other species via the OPTIC pipeline.

BT.26536 (Cow)   CCL21 (Human)  

Genome Location

Sequence Coding sequence

Length: 396 bp    Location:991214..989935   Strand:-
Raw sequence 
>bmy_05701
ATGGCTCAGTCGCTGATTCTGAGCATCCTTGTCCTAGTCCTGGCCTTCTGCATCCCCCAGACCCAAGGCAGTGATGGAGGAGCACAGGACTGTTGCCTCAAGTACAGCCTAAGGAAGATTCCCACCCACGTTGTCCGCAGCTACCGGAAGCAGGAACCAAGCCTGGGTTGCCCCATCCCAGCTATCCTGTTCTCGCCTCGGAAACGCTCTCAGCCAGAGCTATGTGCAGACCCTAGAAAGGCCTGGGTGCAGCAGCTGATGCAGCGTCTGGACAAGCCACCAGCCCCATGGAAACCAGCCCAGGACTGTAAGAAGGACAAGGGGGCCCCCAAGTCTGGCAAGAAGGGAAAGAGCTCCAAAGGCTGTAAGAGGACTGAGACCCCAAAACGGCCATAG

Related Sequences

bmy_05701T0 Protein

Length: 132 aa      
>bmy_05701T0
MAQSLILSILVLVLAFCIPQTQGSDGGAQDCCLKYSLRKIPTHVVRSYRKQEPSLGCPIPAILFSPRKRSQPELCADPRKAWVQQLMQRLDKPPAPWKPAQDCKKDKGAPKSGKKGKSSKGCKRTETPKRP*