Part of scaffold_207 (Scaffold)

For more information consult the page for scaffold_207 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM116 ENSTTRG00000010783 (Bottlenosed dolphin)

Gene Details

transmembrane protein 116

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010220, Bottlenosed dolphin)

Protein Percentage 83.57%
cDNA percentage 87.86%
Ka/Ks Ratio 0.92784 (Ka = 0.1325, Ks = 0.1428)

BT.53553 ENSBTAG00000006659 (Cow)

Gene Details

transmembrane protein 116

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000051611, Cow)

Protein Percentage 76.79%
cDNA percentage 82.74%
Ka/Ks Ratio 0.87759 (Ka = 0.1954, Ks = 0.2227)

TMEM116  (Minke Whale)

Gene Details

transmembrane protein 116

External Links

Gene match (Identifier: BACU003451, Minke Whale)

Protein Percentage 86.07%
cDNA percentage 89.4%
Ka/Ks Ratio 1.20188 (Ka = 0.1217, Ks = 0.1013)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 843 bp    Location:638952..650295   Strand:+
>bmy_05727
ATGATGGGCTGTTTTGATTTTCACCTAGATATTCTACATTTCCTCATTTTTCTACACTGTCAATTACATCTGGTACCTGTACAAAGAGCTGAGGATGAAACCCCACCAGAGTGGACAGAGCACAGTTCCGCTGGACAAAGTGCAGTTATAGGTTATACCTGTCGAGTTAGTCAAACAGCCATCATTTTGTCAAGCCTGATACCTCTACTATTGATGATACCTGTATTCTGTTTGGGCAATGCCAGTGAATGTTTCCGCAACTTCAGCCAGAGCCACAGGTGTATCCTGATGTACTCACCACCAACAGCCATGGCTAAAGTCCTGCCTTCTGCCAACACATCAGTCTGTAGCACACTTTATTTTTATGGGCTTATCATTTTCCTGGCCAGCTTTCTACTCAGCCTCCTCACCATTGTGGTCTTACTCATTCAAGCCCAGACACTTTATAAGAAGTTTCTGAAATCGACTGGCTTTCTGGGGAGTGAACAGTGGGCAGTGATTCACATAGTGGAGCAGCGAGTACGCTTCTACCCAGTGGCCTTCTTTTGCTGCTGGGGCCCAGCTGTCATTCTGATGATCATAAAGATGACTAAGCCACAGGACACCAAACTTCACATGGCCCTCTATGTTCTCCAGGCTCTAACAGCATCATCTCAGGGTCTGCTCAACTGTGGAGTATACGGCTGGACACAGTACAAGTTCTACCAACTAAAGCAAGAGGCTCGGCATGATGCAGACACCCAGACACCATTATTATGCTCACAGAAGAGATTCTATAGCAGGGGCCTAGATCCATTGGAGTCTACCATTGCTTTTGCTAATAGCACCTCCACCATTCTTTGA

Related Sequences

bmy_05727T0 Protein

Length: 281 aa      View alignments
>bmy_05727T0
MMGCFDFHLDILHFLIFLHCQLHLVPVQRAEDETPPEWTEHSSAGQSAVIGYTCRVSQTAIILSSLIPLLLMIPVFCLGNASECFRNFSQSHRCILMYSPPTAMAKVLPSANTSVCSTLYFYGLIIFLASFLLSLLTIVVLLIQAQTLYKKFLKSTGFLGSEQWAVIHIVEQRVRFYPVAFFCCWGPAVILMIIKMTKPQDTKLHMALYVLQALTASSQGLLNCGVYGWTQYKFYQLKQEARHDADTQTPLLCSQKRFYSRGLDPLESTIAFANSTSTIL*